RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 WDR81Q562E7 1941 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 IGKV3D-20A0A0C4DH25 116 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 A0A0G2JNG1 304 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 C5orf60A6NFR6 353 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 C15orf62A8K5M9 175 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 TMCC2O75069 709 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 WISP2O76076 250 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 LIPFP07098 398 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 CFC1BP0CG36 223 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 CFC1P0CG37 223 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 FGF5P12034 268 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 PAX1P15863 534 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 CDKN1AP38936 164 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 KIR2DS5Q14953 304 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 ASPRV1Q53RT3 343 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 CEACAM20Q6UY09 585 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 TTC39CQ8N584 583 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 OR10V1Q8NGI7 309 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 TM9SF4Q92544 642 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 DDOQ99489 341 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 SEMA6AQ9H2E6 1030 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 DNAJC18Q9H819 358 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 SCRT2Q9NQ03 307 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.13□□□□□ -1.91
VBP1-204ENST00000625964 RCC2Q9P258 522 aaKnown RBP3.13□□□□□ -1.91
VBP1-204ENST00000625964 FBXL17Q9UF56 701 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 GAB2Q9UQC2 676 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 YIPF1Q9Y548 306 aa3.13□□□□□ -1.91
VBP1-204ENST00000625964 ARHGEF40Q8TER5 1519 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 A0A1W2PPI3 338 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 TMEM8BA6NDV4 472 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 PMS2P5A8MQ11 134 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 J3QR06 171 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 PLK4O00444 970 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 AP3D1O14617 1153 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 PRKNO60260 465 aaPredicted RBP3.12□□□□□ -1.91
VBP1-204ENST00000625964 SYNCRIPO60506 623 aaKnown RBP3.12□□□□□ -1.91
VBP1-204ENST00000625964 OR2C1O95371 312 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 CAVIN2O95810 425 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 NR3C1P04150 777 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 TFAP2AP05549 437 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 KRT5P13647 590 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 GABRB1P18505 474 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 PON1P27169 355 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 TM4SF1P30408 202 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 ERVK11-1P61568 191 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 PPP2R2BQ00005 443 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 SPOCK1Q08629 439 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 KIR2DS3Q14952 304 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 RARS2Q5T160 578 aaKnown RBP3.12□□□□□ -1.91
VBP1-204ENST00000625964 NDUFAF5Q5TEU4 345 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 SFMBT2Q5VUG0 894 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 SLC35E4Q6ICL7 350 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 SLC27A1Q6PCB7 646 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 TPRG1Q6ZUI0 275 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 GALNT13Q8IUC8 556 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 ARID3BQ8IVW6 561 aaPredicted RBP3.12□□□□□ -1.91
VBP1-204ENST00000625964 STPG4Q8N801 248 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 ZNF485Q8NCK3 441 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 SKA1Q96BD8 255 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 ZNF501Q96CX3 271 aaPredicted RBP3.12□□□□□ -1.91
VBP1-204ENST00000625964 PGAM5Q96HS1 289 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 DUX3Q96PT4 197 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 GFI1Q99684 422 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 SRSF8Q9BRL6 282 aaKnown RBP3.12□□□□□ -1.91
VBP1-204ENST00000625964 HGH1Q9BTY7 390 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 C1QTNF1Q9BXJ1 281 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 BICC1Q9H694 974 aaKnown RBP3.12□□□□□ -1.91
VBP1-204ENST00000625964 SLC38A7Q9NVC3 462 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 PTTG2Q9NZH5 202 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 TSPYL4Q9UJ04 414 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 SMAD5-AS1Q9Y6J3 95 aa3.12□□□□□ -1.91
VBP1-204ENST00000625964 H0YIN7 160 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 CIDEAO60543 219 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 AMBPP02760 352 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 INHBAP08476 426 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 DCTP40126 519 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 HADHAP40939 763 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 MMP15P51511 669 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 GEMIN4P57678 1058 aaKnown RBP3.11□□□□□ -1.91
VBP1-204ENST00000625964 FCN2Q15485 313 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 DUOXA1Q1HG43 343 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 RAB6CQ53S08 254 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 WDR38Q5JTN6 314 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 BSPRYQ5W0U4 402 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 C1orf122Q6ZSJ8 110 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 ANO5Q75V66 913 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 ZNF534Q76KX8 674 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 SH2D6Q7Z4S9 175 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 CEP97Q8IW35 865 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 SCYL3Q8IZE3 742 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 ZNF524Q96C55 264 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 PRMT6Q96LA8 375 aaPredicted RBP3.11□□□□□ -1.91
VBP1-204ENST00000625964 C17orf77Q96MU5 243 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 SLX1AQ9BQ83 275 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 RAB6CQ9H0N0 254 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 SMARCAD1Q9H4L7 1026 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 APOBEC3GQ9HC16 384 aaKnown RBP3.11□□□□□ -1.91
VBP1-204ENST00000625964 PAG1Q9NWQ8 432 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms