RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MKS1Q9NXB0 559 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 DCDC2Q9UHG0 476 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 PRDM4Q9UKN5 801 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 PRPF4O43172 522 aaKnown RBP eCLIP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 GLRA3O75311 464 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 WISP3O95389 354 aaPredicted RBP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 HOXC4P09017 264 aaPredicted RBP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 CCDC166P0CW27 439 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 PBLDP30039 288 aaPredicted RBP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 RPA3P35244 121 aaPredicted RBP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 CSHL1Q14406 222 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 NFATC4Q14934 902 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 NAPRTQ6XQN6 538 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 KYAT3Q6YP21 454 aaKnown RBP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 CDHR3Q6ZTQ4 885 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 ABI3BPQ7Z7G0 1075 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 CLEC14AQ86T13 490 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 CENPLQ8N0S6 344 aaPredicted RBP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 PLD6Q8N2A8 252 aaKnown RBP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 SPATA6LQ8N4H0 392 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 ZBTB2Q8N680 514 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 ANKRD42Q8N9B4 389 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 ANKRD49Q8WVL7 239 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 AASDHPPTQ9NRN7 309 aa17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 EIF2B4Q9UI10 523 aaKnown RBP17.54■□□□□ 0.4
PTCHD3-202ENST00000622555 TMEM202A6NGA9 273 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 SRRM3A6NNA2 597 aaPredicted RBP17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 NUAK1O60285 661 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 GSTA1P08263 222 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 COL6A2P12110 1019 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 HTR1BP28222 390 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 CCR7P32248 378 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 THOP1P52888 689 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 YPEL5P62699 121 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 Q6ZSR6 202 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 CPNE9Q8IYJ1 553 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 TCP10LQ8TDR4 215 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 ELMO1Q92556 727 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 NXNL1Q96CM4 212 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 SLC6A18Q96N87 628 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 CCM2Q9BSQ5 444 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 C1QTNF1Q9BXJ1 281 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 FAM126AQ9BYI3 521 aaPredicted RBP17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 UNKQ9C0B0 810 aaKnown RBP17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 C12orf65Q9H3J6 166 aaKnown RBP17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 ZNF358Q9NW07 568 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 FAM8A1Q9UBU6 413 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 MOSPD1Q9UJG1 213 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 FBXO4Q9UKT5 387 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 GPR34Q9UPC5 381 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 MUC3AQ02505 3323 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 SPAG17Q6Q759 2223 aa17.53■□□□□ 0.4
PTCHD3-202ENST00000622555 ERICH4A6NGS2 130 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 GPR89AB7ZAQ6 455 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 TOR1BO14657 336 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 CHUKO15111 745 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 LILRB5O75023 590 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 KLHL2O95198 593 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 CEACAM5P06731 702 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 LTA4HP09960 611 aaKnown RBP17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 GPR89BP0CG08 455 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 KELP23276 732 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 AOAHP28039 575 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 AVPR2P30518 371 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 SLC26A3P40879 764 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 RABIFP47224 123 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 ATP1A2P50993 1020 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 IL2P60568 153 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 DLG1Q12959 904 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 BOP1Q14137 746 aaKnown RBP17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 MPP2Q14168 576 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 INSCQ1MX18 579 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 TTLL9Q3SXZ7 439 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 N4BP2L1Q5TBK1 243 aaPredicted RBP17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 LRRTM4Q86VH4 590 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 ZNF547Q8IVP9 402 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 NKAPQ8N5F7 415 aaKnown RBP17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 OR13H1Q8NG92 308 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 UBXN10Q96LJ8 280 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 WDR92Q96MX6 357 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 MIR1-1HGQ9H1L0 117 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 DUSP15Q9H1R2 295 aaPredicted RBP17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 LATS2Q9NRM7 1088 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 IGSF5Q9NSI5 407 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 NKIRAS1Q9NYS0 192 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 ZNHIT2Q9UHR6 403 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 GRID1Q9ULK0 1009 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 RUVBL2Q9Y230 463 aaKnown RBP17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 SLC17A4Q9Y2C5 497 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 PRKAB1Q9Y478 270 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 SLCO1B1Q9Y6L6 691 aa17.52■□□□□ 0.4
PTCHD3-202ENST00000622555 KPNA5O15131 536 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 GRID2O43424 1007 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 ZWINTO95229 277 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 MAOBP27338 520 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 GNGT1P63211 74 aa17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 SRSF5Q13243 272 aaKnown RBP17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 SEPT7Q16181 437 aaKnown RBP17.52■□□□□ 0.39
PTCHD3-202ENST00000622555 ZSCAN26Q16670 478 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms