RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 GULP1Q9UBP9 304 aa10.76□□□□□ -0.69
POLR2J3-221ENST00000621093 RAB21Q9UL25 225 aa10.76□□□□□ -0.69
POLR2J3-221ENST00000621093 GPR34Q9UPC5 381 aa10.76□□□□□ -0.69
POLR2J3-221ENST00000621093 BTBD3Q9Y2F9 522 aa10.76□□□□□ -0.69
POLR2J3-221ENST00000621093 VPS13AQ96RL7 3174 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 YY2O15391 372 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 RIPK2O43353 540 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 DFNA5O60443 496 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 MYF5P13349 255 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 CD59P13987 128 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 RPS3P23396 243 aaKnown RBP eCLIP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 STX2P32856 288 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 PPARGP37231 505 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 ACTR1BP42025 376 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 LEPRP48357 1165 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 CSE1LP55060 971 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 ACTR1AP61163 376 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 NFE2L1Q14494 772 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 BRD3Q15059 726 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 UAP1Q16222 522 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 ZNF658BQ4V348 819 aaPredicted RBP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 PTRHD1Q6GMV3 140 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 SLC30A9Q6PML9 568 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 STRA8Q7Z7C7 330 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 TAF8Q7Z7C8 310 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 CTAGE3PQ8IX95 158 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 LMNTD2Q8IXW0 634 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 EID2Q8N6I1 236 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 PPM1NQ8N819 430 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 ACVR1CQ8NER5 493 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 CCM2Q9BSQ5 444 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 SPATS2LQ9NUQ6 558 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 TRNAU1APQ9NX07 287 aaKnown RBP10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 MYO15AQ9UKN7 3530 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 DMDP11532 3685 aa10.75□□□□□ -0.69
POLR2J3-221ENST00000621093 TRBV23OR9-2A0A075B6M9 112 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 PRR19A6NJB7 356 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 GPR89AB7ZAQ6 455 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 TRIM38O00635 465 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 SNX2O60749 519 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 SPAG6O75602 509 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 AP2A2O94973 939 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 TRIM16O95361 564 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 OR56A5P0C7T3 313 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 GPR89BP0CG08 455 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 PKMP14618 531 aaKnown RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 CCR7P32248 378 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 PHBP35232 272 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 CD151P48509 253 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 ARHGAP8P85298 464 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 TIAL1Q01085 375 aaKnown RBP eCLIP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 ILF3Q12906 894 aaKnown RBP eCLIP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 ELOCQ15369 112 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 SEPT7Q16181 437 aaKnown RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 RNF187Q5TA31 235 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 STPG1Q5TH74 334 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 CYS1Q717R9 158 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 TRMT10CQ7L0Y3 403 aaKnown RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 AMZ2Q86W34 360 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 CFAP206Q8IYR0 622 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 FSTL5Q8N475 847 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 UBLCP1Q8WVY7 318 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 PATE1Q8WXA2 126 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 ZNF514Q96K75 400 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 LINC00615Q96LM1 132 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 CAMK1GQ96NX5 476 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 SLC30A3Q99726 388 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 TIMM29Q9BSF4 260 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 MCMBPQ9BTE3 642 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 AARSD1Q9BTE6 412 aaKnown RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 FUT8Q9BYC5 575 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 GSDMCQ9BYG8 508 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 OSGEPL1Q9H4B0 414 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 ACSS3Q9H6R3 686 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 PRDM8Q9NQV8 689 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 TAAR2Q9P1P5 351 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 SIRPGQ9P1W8 387 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 TBC1D29Q9UFV1 150 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 GNPTGQ9UJJ9 305 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 MED16Q9Y2X0 877 aa10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 COL5A1P20908 1838 aaPredicted RBP10.74□□□□□ -0.69
POLR2J3-221ENST00000621093 A0A087WUV0 522 aaPredicted RBP10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 MGAT4DA6NG13 374 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 B4DGG1 531 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 LMO7DNF2Z398 122 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 POC1B-GALNT4F8VUJ3 575 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 PFDN6O15212 129 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 YKT6O15498 198 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 SH3BP5O60239 455 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 PCDHGA12O60330 932 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 FTH1P02794 183 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 ESR1P03372 595 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 SHBGP04278 402 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 ANXA6P08133 673 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 ZNF883P0CG24 379 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 RPL10P27635 214 aaKnown RBP10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 PDHA2P29803 388 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 PREPP48147 710 aa10.73□□□□□ -0.69
POLR2J3-221ENST00000621093 CDKN2DP55273 166 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms