RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 DGCR6LQ9BY27 220 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 ZYG11BQ9C0D3 744 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 MAGEE1Q9HCI5 957 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 ADARB2Q9NS39 739 aaKnown RBP19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 COMMD8Q9NX08 183 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 EVLQ9UI08 416 aaPredicted RBP19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 DAPK2Q9UIK4 370 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 TTC36A6NLP5 189 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 AXIN1O15169 862 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 XYLBO75191 536 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 FGF1P05230 155 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 FMO4P31512 558 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 RPL9P32969 192 aaKnown RBP19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 NKG7Q16617 165 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 Q6ZSR9 355 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 METTL23Q86XA0 190 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 BTN2A3PQ96KV6 586 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 AKIP1Q9NQ31 210 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 SMPD4Q9NXE4 827 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 TAS2R13Q9NYV9 303 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 GALPQ9UBC7 116 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 ASB1Q9Y576 335 aa19.35■□□□□ 0.69
PDLIM3-212ENST00000620787 TBC1D4O60343 1298 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 OR4F21O95013 312 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 CYP11A1P05108 521 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 UGT2B4P06133 528 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 HLA-DPA1P20036 260 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 AGXTP21549 392 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 NFKBIAP25963 317 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 RAD23AP54725 363 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 PPP2R2BQ00005 443 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 CD47Q08722 323 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 CTF1Q16619 201 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 HABP4Q5JVS0 413 aaKnown RBP19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 PRAMEF19Q5SWL8 479 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 ANKRD34AQ69YU3 496 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 GPR142Q7Z601 462 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 HS3ST5Q8IZT8 346 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 NAT16Q8N8M0 369 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 NPLOC4Q8TAT6 608 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 BRSK1Q8TDC3 778 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 NUDT8Q8WV74 236 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 ESAMQ96AP7 390 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 SLC39A13Q96H72 371 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 ACTL8Q9H568 366 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 HEBP1Q9NRV9 189 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 BAG5Q9UL15 447 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 TRIM17Q9Y577 477 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 ARNTLO00327 626 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 BTN3A1O00481 513 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 NOBOXO60393 691 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 SOAT2O75908 522 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 DDNO94850 711 aaPredicted RBP19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 PCMT1P22061 227 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 GP2P55259 537 aaKnown RBP19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 GRB14Q14449 540 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 ATP6AP1LQ52LC2 224 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 ENPP6Q6UWR7 440 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 AGMOQ6ZNB7 445 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 GPRIN3Q6ZVF9 776 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 ANKRD13BQ86YJ7 626 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 TTC30BQ8N4P2 665 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 DCBLD1Q8N8Z6 715 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 OR56A4Q8NGH8 313 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 ZNF583Q96ND8 569 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 GPR21Q99679 349 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 DNAJB9Q9UBS3 223 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 NAALAD2Q9Y3Q0 740 aa19.34■□□□□ 0.69
PDLIM3-212ENST00000620787 MUSKO15146 869 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 UGT2B11O75310 529 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 HPCAL1P37235 193 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 TPD52P55327 224 aaPredicted RBP19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 TRIM32Q13049 653 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 MS4A13Q5J8X5 152 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 TXNDC11Q6PKC3 985 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 CD300LGQ6UXG3 332 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 CDYL2Q8N8U2 506 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 ZNF555Q8NEP9 628 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 SDCCAG3Q96C92 435 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 CDKN2AIPNLQ96HQ2 116 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 ZNF641Q96N77 438 aaPredicted RBP19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 CCDC115Q96NT0 180 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 USE1Q9NZ43 259 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 EIF2B4Q9UI10 523 aaKnown RBP19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 TLR6Q9Y2C9 796 aa19.33■□□□□ 0.69
PDLIM3-212ENST00000620787 TDRD15B5MCY1 1934 aaKnown RBP19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 FAM92AA1XBS5 289 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 JRKO75564 520 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 INMTO95050 263 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 ITIH1P19827 911 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 HK3P52790 923 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 DGKQP52824 942 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 OCA2Q04671 838 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 EPS8Q12929 822 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 KCNAB2Q13303 367 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 HASPINQ8TF76 798 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 CCDC138Q96M89 665 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 HMG20AQ9NP66 347 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 ATAD3AQ9NVI7 634 aa19.33■□□□□ 0.68
PDLIM3-212ENST00000620787 PAK1IP1Q9NWT1 392 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms