RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 YTHDF1Q9BYJ9 559 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 MUC13Q9H3R2 512 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 CATSPERBQ9H7T0 1116 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ARMC1Q9NVT9 282 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 SMPD4Q9NXE4 827 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNHIT2Q9UHR6 403 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 SUPT3HB4E1H0 165 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 H3BMQ9 156 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 I6L893 689 aaPredicted RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 K7EPI3 171 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 COQ9O75208 318 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 LRG1P02750 347 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF182P17025 639 aaPredicted RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ATP6V1B2P21281 511 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 RPL10P27635 214 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 YAP1P46937 504 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ATP6V0D1P61421 351 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 GNA12Q03113 381 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 LRP8Q14114 963 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF846Q147U1 533 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 PERM1Q5SV97 790 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 HECTD3Q5T447 861 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 NIPAL1Q6NVV3 410 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 HACD2Q6Y1H2 254 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 BEND5Q7L4P6 421 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TP53INP2Q8IXH6 220 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TRPV3Q8NET8 790 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 FEM1CQ96JP0 617 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 SPATA17Q96L03 361 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 COG8Q96MW5 612 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 RAD9AQ99638 391 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 DGCR6LQ9BY27 220 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 RPF2Q9H7B2 306 aaKnown RBP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 MEAF6Q9HAF1 191 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 PALMDQ9NP74 551 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 ACTR3BQ9P1U1 418 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 TCAF1Q9Y4C2 921 aa6.92□□□□□ -1.3
SRGAP3-213ENST00000618999 MYO18AQ92614 2054 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 FUOMA2VDF0 154 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 CCDC154A6NI56 674 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 C9JVG2 144 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 PLOD2O00469 737 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 DCLK1O15075 740 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 CNOT3O75175 753 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 MT-CYBP00156 380 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 MT-ND1P03886 318 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 GNAO1P09471 354 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 CD1EP15812 388 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 SERPINB1P30740 379 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 SCAPQ12770 1279 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 PMS2P3Q13401 168 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 ACAP2Q15057 778 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM98BQ52LJ0 330 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 FGD3Q5JSP0 725 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 PLPP4Q5VZY2 271 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 RAP1GAP2Q684P5 730 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 TIGD7Q6NT04 549 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 KIAA0408Q6ZU52 694 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 RPS27LQ71UM5 84 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 DNAJB7Q7Z6W7 309 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 ZDHHC13Q8IUH4 622 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 LSMEM2Q8N112 164 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 PTGR2Q8N8N7 351 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 MFSD2AQ8NA29 543 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 NCLNQ969V3 563 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 RPRD1AQ96P16 312 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 TCF25Q9BQ70 676 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 MLPHQ9BV36 600 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 HERC2P3Q9BVR0 1158 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 HPS4Q9NQG7 708 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 RIC8BQ9NVN3 520 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 IFT80Q9P2H3 777 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 DNMT3LQ9UJW3 386 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 PCDHB3Q9Y5E6 796 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 MYO9BQ13459 2157 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 UBA6A0AVT1 1052 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 AZIN1O14977 448 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 ARPC2O15144 300 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 SNX2O60749 519 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 CPNE3O75131 537 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 VPS4BO75351 444 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 ATE1O95260 518 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 VNN2O95498 520 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 CNPP09543 421 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 IDO1P14902 403 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 RAD23AP54725 363 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 NSUN2Q08J23 767 aaKnown RBP eCLIP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 RBBP7Q16576 425 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 NHSL2Q5HYW2 709 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 TTC23Q5W5X9 447 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 CEP97Q8IW35 865 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 ZCCHC7Q8N3Z6 543 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 ZBTB18Q99592 522 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 APOL5Q9BWW9 433 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 NPLQ9BXD5 320 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 WDR12Q9GZL7 423 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 GLOD4Q9HC38 313 aa6.91□□□□□ -1.3
SRGAP3-213ENST00000618999 FBRSL1Q9HCM7 1045 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms