RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 NDNQ99608 321 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 NTPCRQ9BSD7 190 aaKnown RBP10.79□□□□□ -0.68
POLR2A-209ENST00000617998 NPHS2Q9NP85 383 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 CAPN8A6NHC0 703 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 CCT8L1PA6NM43 557 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 F11P03951 625 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 TMED10P49755 219 aaKnown RBP10.79□□□□□ -0.68
POLR2A-209ENST00000617998 CLCN7P51798 805 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 MED27Q6P2C8 311 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 IKBIPQ70UQ0 350 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.79□□□□□ -0.68
POLR2A-209ENST00000617998 HIST1H2AAQ96QV6 131 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 TMEM245Q9H330 911 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 PCDHGC3Q9UN70 934 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 PEX1O43933 1283 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 CDH16O75309 829 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 CCDC166P0CW27 439 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 CD44P16070 742 aaKnown RBP10.79□□□□□ -0.68
POLR2A-209ENST00000617998 GDI2P50395 445 aaKnown RBP10.79□□□□□ -0.68
POLR2A-209ENST00000617998 TMEM198Q66K66 360 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 MACC1Q6ZN28 852 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 SNX20Q7Z614 316 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 MINDY1Q8N5J2 469 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 TIGARQ9NQ88 270 aa10.79□□□□□ -0.68
POLR2A-209ENST00000617998 MBLAC1A4D2B0 266 aaPredicted RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 KDELR3O43731 214 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 LTA4HP09960 611 aaKnown RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 PLK1P53350 603 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 GLIS3Q8NEA6 775 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 FKBPLQ9UIM3 349 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 NDUFS4O43181 175 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 CPNE6O95741 557 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 AVPR2P30518 371 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 ABCG1P45844 678 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 TAF1AQ15573 450 aaPredicted RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 RALGPS1Q5JS13 557 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 LRRC66Q68CR7 880 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 TTLL10Q6ZVT0 673 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 DCAKDQ8WVC6 231 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 ACTR5Q9H9F9 607 aaPredicted RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 PCDH18Q9HCL0 1135 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 KAT6AQ92794 2004 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 KRT75O95678 551 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 COL9A1P20849 921 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 ATP6V0D1P61421 351 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 RACK1P63244 317 aaKnown RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 NUP54Q7Z3B4 507 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 MDGA1Q8NFP4 955 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 SPPL2AQ8TCT8 520 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 KLHL29Q96CT2 875 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 LRMDAQ9H2I8 198 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 ELL3Q9HB65 397 aaPredicted RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 PREBQ9HCU5 417 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 AGPSO00116 658 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 DHX15O43143 795 aaKnown RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 TUBB3Q13509 450 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 CYLC2Q14093 348 aaPredicted RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 FAM153CQ494X1 144 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 DPY19L3Q6ZPD9 716 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 POLNQ7Z5Q5 900 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 SMPDL3AQ92484 453 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 GFM2Q969S9 779 aaKnown RBP10.78□□□□□ -0.68
POLR2A-209ENST00000617998 RELTQ969Z4 430 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 SLC46A2Q9BY10 475 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 CEP44Q9C0F1 390 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 CDC7O00311 574 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 PIRO00625 290 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 STC2O76061 302 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 OTCP00480 354 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 AGTP01019 485 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 SLC6A11P48066 632 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 MAPK12P53778 367 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 CXADRP78310 365 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 CHI3L2Q15782 390 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 LEXMQ3ZCV2 418 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 JOSD2Q8TAC2 188 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 P2RY11Q96G91 374 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 OBP2AQ9NY56 170 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 B4GALT6Q9UBX8 382 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 SNX5Q9Y5X3 404 aa10.78□□□□□ -0.68
POLR2A-209ENST00000617998 TLR4O00206 839 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 EPN2O95208 641 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 NTRK1P04629 796 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 GPR33Q49SQ1 333 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 SLC8B1Q6J4K2 584 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.68
POLR2A-209ENST00000617998 PARP9Q8IXQ6 854 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 FUKQ8N0W3 1084 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 SEC14L1Q92503 715 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 NRBF2Q96F24 287 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 CRB3Q9BUF7 120 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 NECTIN3Q9NQS3 549 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 CHST7Q9NS84 486 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 SPIN1Q9Y657 262 aaPredicted RBP10.77□□□□□ -0.68
POLR2A-209ENST00000617998 V9GYQ6 96 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 NRXN3Q9Y4C0 1643 aa10.77□□□□□ -0.68
POLR2A-209ENST00000617998 AP3D1O14617 1153 aa10.77□□□□□ -0.69
POLR2A-209ENST00000617998 TGFB1I1O43294 461 aa10.77□□□□□ -0.69
POLR2A-209ENST00000617998 DSG2Q14126 1118 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms