RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ITGALP20701 1170 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 SPAM1P38567 509 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 ACADVLP49748 655 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 AGKQ53H12 422 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 CERS6Q6ZMG9 384 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 CLYBLQ8N0X4 340 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 RNF148Q8N7C7 305 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 ZNF366Q8N895 744 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 SNX31Q8N9S9 440 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 PHC3Q8NDX5 983 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 PLEKHG4BQ96PX9 1271 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 MCCC1Q96RQ3 725 aaPredicted RBP18.88■□□□□ 0.61
MMP28-204ENST00000615136 SLC25A23Q9BV35 468 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 CEP44Q9C0F1 390 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 YIPF3Q9GZM5 350 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 BRD9Q9H8M2 597 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 MID1IP1Q9NPA3 183 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 SEMA4BQ9NPR2 832 aaPredicted RBP18.88■□□□□ 0.61
MMP28-204ENST00000615136 DHRS7Q9Y394 339 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 PPIL1Q9Y3C6 166 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 SZT2Q5T011 3432 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 GPC4O75487 556 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 CYP17A1P05093 508 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 SNRPB2P08579 225 aaKnown RBP18.88■□□□□ 0.61
MMP28-204ENST00000615136 FGF4P08620 206 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 C1SP09871 688 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 VCLP18206 1134 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 MSX2P35548 267 aaPredicted RBP18.88■□□□□ 0.61
MMP28-204ENST00000615136 PBX2P40425 430 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 DHCR24Q15392 516 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 RARS2Q5T160 578 aaKnown RBP18.88■□□□□ 0.61
MMP28-204ENST00000615136 PTRHD1Q6GMV3 140 aaKnown RBP18.88■□□□□ 0.61
MMP28-204ENST00000615136 UGT3A1Q6NUS8 523 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 HACD2Q6Y1H2 254 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 ICA1LQ8NDH6 482 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 FRS2Q8WU20 508 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 SMG7Q92540 1137 aaKnown RBP18.88■□□□□ 0.61
MMP28-204ENST00000615136 TRAPPC9Q96Q05 1148 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 CLPBQ9H078 707 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 CCDC167Q9P0B6 97 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 MARK1Q9P0L2 795 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 B4GALT6Q9UBX8 382 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 GIMAP2Q9UG22 337 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 APPL1Q9UKG1 709 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 YBX2Q9Y2T7 364 aaKnown RBP18.88■□□□□ 0.61
MMP28-204ENST00000615136 DNAJC15Q9Y5T4 150 aa18.88■□□□□ 0.61
MMP28-204ENST00000615136 PIKFYVEQ9Y2I7 2098 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 MAP3K13O43283 966 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 KLK8O60259 260 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 CAPNS1P04632 268 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 ZNF7P17097 686 aaPredicted RBP18.87■□□□□ 0.61
MMP28-204ENST00000615136 PRDX3P30048 256 aaKnown RBP18.87■□□□□ 0.61
MMP28-204ENST00000615136 C18orf21Q32NC0 220 aaPredicted RBP18.87■□□□□ 0.61
MMP28-204ENST00000615136 RNF220Q5VTB9 566 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 C8orf82Q6P1X6 216 aaPredicted RBP18.87■□□□□ 0.61
MMP28-204ENST00000615136 RAB44Q7Z6P3 723 aaPredicted RBP18.87■□□□□ 0.61
MMP28-204ENST00000615136 TICAM1Q8IUC6 712 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 VN1R2Q8NFZ6 395 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.87■□□□□ 0.61
MMP28-204ENST00000615136 DCUN1D1Q96GG9 259 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 ZFYVE19Q96K21 471 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 PIDD1Q9HB75 910 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 FBRSL1Q9HCM7 1045 aaKnown RBP18.87■□□□□ 0.61
MMP28-204ENST00000615136 CD84Q9UIB8 345 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 MBD1Q9UIS9 605 aaPredicted RBP18.87■□□□□ 0.61
MMP28-204ENST00000615136 CRLS1Q9UJA2 301 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 PCDHB1Q9Y5F3 818 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 COMMD10Q9Y6G5 202 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 C2orf16Q68DN1 1984 aa18.87■□□□□ 0.61
MMP28-204ENST00000615136 E7ENX8 843 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 RPS17P08708 135 aaKnown RBP18.86■□□□□ 0.61
MMP28-204ENST00000615136 ZCCHC18P0CG32 403 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 RPS3P23396 243 aaKnown RBP eCLIP18.86■□□□□ 0.61
MMP28-204ENST00000615136 CLCQ05315 142 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 GRM2Q14416 872 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 MMEL1Q495T6 779 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 ATP13A5Q4VNC0 1218 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 GRAMD4Q6IC98 578 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 USP45Q70EL2 814 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 RBFAQ8N0V3 343 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 NXPE1Q8N323 547 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 CBARPQ8N350 705 aaPredicted RBP18.86■□□□□ 0.61
MMP28-204ENST00000615136 CATSPER1Q8NEC5 780 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 MTIF3Q9H2K0 278 aaKnown RBP18.86■□□□□ 0.61
MMP28-204ENST00000615136 TUBB1Q9H4B7 451 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 SOBPA7XYQ1 873 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 SLC25A14O95258 325 aaPredicted RBP18.86■□□□□ 0.61
MMP28-204ENST00000615136 TRIM16O95361 564 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 CTSLP07711 333 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 ALDOCP09972 364 aaKnown RBP18.86■□□□□ 0.61
MMP28-204ENST00000615136 CISD3P0C7P0 127 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 TCF3P15923 654 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 POLR2EP19388 210 aaKnown RBP18.86■□□□□ 0.61
MMP28-204ENST00000615136 FOXB2Q5VYV0 432 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 KANK2Q63ZY3 851 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 GDPD4Q6W3E5 623 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 LILRA2Q8N149 483 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 AHI1Q8N157 1196 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 LRGUKQ96M69 825 aa18.86■□□□□ 0.61
MMP28-204ENST00000615136 ZNF641Q96N77 438 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms