RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 HADHBP55084 474 aaKnown RBP13.63□□□□□ -0.23
CHD1-212ENST00000614616 CCBE1Q6UXH8 406 aaPredicted RBP13.63□□□□□ -0.23
CHD1-212ENST00000614616 C5orf51A6NDU8 294 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 HCN3Q9P1Z3 774 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 FKBP7Q9Y680 259 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 RGS19P49795 217 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 GALEQ14376 348 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 USP45Q70EL2 814 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 PCDH19Q8TAB3 1148 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 CPXM1Q96SM3 734 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 B3GNT3Q9Y2A9 372 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 NFAT5O94916 1531 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 CYB561D2O14569 222 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PAPSS2O95340 614 aaPredicted RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 LHX1P48742 406 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 SH3PXD2AQ5TCZ1 1133 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 NOXA1Q86UR1 476 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 DNAJB8Q8NHS0 232 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 ZFP3Q96NJ6 502 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 WACQ9BTA9 647 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CYP3A7-CYP3A51PA0A087WV96 503 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 KLF11O14901 512 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CYP3A7P24462 503 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 JAM2P57087 298 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 RNASEH2BQ5TBB1 312 aaKnown RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CMC1Q7Z7K0 106 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PRKAB1Q9Y478 270 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 ANXA5P08758 320 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 MBL2P11226 248 aaPredicted RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 XRCC1P18887 633 aaPredicted RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 CCR10P46092 362 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 GABARAPL2P60520 117 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 FGL1Q08830 312 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 NUDT18Q6ZVK8 323 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 SSX6Q7RTT6 188 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 SLCO2A1Q92959 643 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 MTMR9Q96QG7 549 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 ACTR6Q9GZN1 396 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CXCR6O00574 342 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 ARCN1P48444 511 aaKnown RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 GPSM2P81274 684 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 FOXM1Q08050 763 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 ZNF433Q8N7K0 673 aaPredicted RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 ARL5BQ96KC2 179 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 RGCCQ9H4X1 137 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 FFAR3O14843 346 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 DCLK1O15075 740 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 GPR42O15529 346 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 APOC3P02656 99 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CDKN2CP42773 168 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 BRMS1LQ5PSV4 323 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 IRGQQ8WZA9 623 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 SLC9A3R1O14745 358 aaPredicted RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 UPK1BO75841 260 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 RLN2P04090 185 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 ITGB6P18564 788 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CACNB3P54284 484 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 RHDQ02161 417 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PAMR1Q6UXH9 720 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 MFSD2AQ8NA29 543 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 KLHL6Q8WZ60 621 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PNMA5Q96PV4 448 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PHB2Q99623 299 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CNOT11Q9UKZ1 510 aaKnown RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 POLR1DQ9Y2S0 133 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 MON2Q7Z3U7 1717 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PET100P0DJ07 73 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CREB1P16220 341 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 EVI2BP34910 448 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PRMT2P55345 433 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 OGFRL1Q5TC84 451 aaPredicted RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 OR52E8Q6IFG1 317 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 ERMP1Q7Z2K6 904 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 TMEM199Q8N511 208 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 TMEM159Q96B96 161 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 PRICKLE1Q96MT3 831 aaPredicted RBP13.62□□□□□ -0.23
CHD1-212ENST00000614616 ASTN1O14525 1302 aa13.62□□□□□ -0.23
CHD1-212ENST00000614616 CCNB2O95067 398 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 RAB3BP20337 219 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 NDST1P52848 882 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 GRB14Q14449 540 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 SLC15A4Q8N697 577 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 SLC28A2O43868 658 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 GATBO75879 557 aaKnown RBP13.61□□□□□ -0.23
CHD1-212ENST00000614616 YBX3P16989 372 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHD1-212ENST00000614616 ASMTP46597 345 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 WDR4P57081 412 aaKnown RBP13.61□□□□□ -0.23
CHD1-212ENST00000614616 ESRP1Q6NXG1 681 aaKnown RBP13.61□□□□□ -0.23
CHD1-212ENST00000614616 PNCKQ6P2M8 343 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 TMEM192Q8IY95 271 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 ATAD1Q8NBU5 361 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 CEP295NLQ96MC4 621 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 HTRA2O43464 458 aaPredicted RBP13.61□□□□□ -0.23
CHD1-212ENST00000614616 HBP1O60381 514 aa13.61□□□□□ -0.23
CHD1-212ENST00000614616 EPCAMP16422 314 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms