RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 TSNARE1Q96NA8 513 aa13.57□□□□□ -0.24
TMEM254-213ENST00000613758 PANX3Q96QZ0 392 aa13.57□□□□□ -0.24
TMEM254-213ENST00000613758 C1QTNF1Q9BXJ1 281 aa13.57□□□□□ -0.24
TMEM254-213ENST00000613758 EBF2Q9HAK2 575 aa13.57□□□□□ -0.24
TMEM254-213ENST00000613758 PHPT1Q9NRX4 125 aaPredicted RBP13.57□□□□□ -0.24
TMEM254-213ENST00000613758 TECTAO75443 2155 aa13.57□□□□□ -0.24
TMEM254-213ENST00000613758 QSOX1O00391 747 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 FPGTO14772 594 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 SNX3O60493 162 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 AKT2P31751 481 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 SLC26A3P40879 764 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 CTSCP53634 463 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 CLDN2P57739 230 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 DLG1Q12959 904 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 USP39Q53GS9 565 aaKnown RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 N4BP2L1Q5TBK1 243 aaPredicted RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 GKAP1Q5VSY0 366 aaPredicted RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 TMEM220Q6QAJ8 160 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 C6orf89Q6UWU4 347 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 FAM47EQ6ZV65 393 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 LCA5Q86VQ0 697 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 GIMAP7Q8NHV1 300 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 INPP5DQ92835 1189 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 FUBP1Q96AE4 644 aaKnown RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 BIRC7Q96CA5 298 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 UBXN10Q96LJ8 280 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 APOOQ9BUR5 198 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 NSRP1Q9H0G5 558 aaKnown RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 EPHX3Q9H6B9 360 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 SPATS2LQ9NUQ6 558 aaKnown RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 TMEM216Q9P0N5 145 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 POM121BA6NF01 834 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 EDF1O60869 148 aaKnown RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 KLHL2O95198 593 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 ZNF37AP17032 561 aaPredicted RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 ZNF8P17098 575 aaPredicted RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 HOXA6P31267 233 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 DMWDQ09019 674 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 SF3A3Q12874 501 aaKnown RBP eCLIP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 GTF2H3Q13889 308 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 CSHL1Q14406 222 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 DOK6Q6PKX4 331 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 TSSK4Q6SA08 328 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 KYAT3Q6YP21 454 aaKnown RBP13.56□□□□□ -0.24
TMEM254-213ENST00000613758 MECRQ9BV79 373 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 TSSK1BQ9BXA7 367 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 MANSC1Q9H8J5 431 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 LATS2Q9NRM7 1088 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 IGSF5Q9NSI5 407 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 CA5BQ9Y2D0 317 aa13.56□□□□□ -0.24
TMEM254-213ENST00000613758 EBAG9O00559 213 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 PLIN3O60664 434 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 MAGEC1O60732 1142 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 FTH1P02794 183 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 LTA4HP09960 611 aaKnown RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 MYCLP1P12525 358 aaPredicted RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 BGNP21810 368 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 CCR7P32248 378 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 FAM83EQ2M2I3 478 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 AGAP9Q5VTM2 703 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 CES4AQ5XG92 561 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 OTOAQ7RTW8 1153 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 NKAPQ8N5F7 415 aaKnown RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 ZBTB2Q8N680 514 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 BEND7Q8N7W2 519 aaPredicted RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 FOXJ1Q92949 421 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 ZNF514Q96K75 400 aaPredicted RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 SPACA7Q96KW9 195 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 BMFQ96LC9 184 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 GPR78Q96P69 363 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 PITPNM3Q9BZ71 974 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 UNKQ9C0B0 810 aaKnown RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 SIRPGQ9P1W8 387 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 DMTF1Q9Y222 760 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 HS3ST3A1Q9Y663 406 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 PRAMEF26H0Y7S4 382 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 CACNB4O00305 520 aaPredicted RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 LAMTOR5O43504 91 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 PROCP04070 461 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 BPGMP07738 259 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 AOAHP28039 575 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 NUDT1P36639 197 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 PRLHRP49683 370 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 IL2P60568 153 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 TSNAXIP1Q2TAA8 658 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 BCL7AQ4VC05 210 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 NAPRTQ6XQN6 538 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 CPNE9Q8IYJ1 553 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 CACNA2D3Q8IZS8 1091 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 DEFB119Q8N690 84 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 EEF1AKMT1Q8WVE0 214 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 SCYL1Q96KG9 808 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 CCM2Q9BSQ5 444 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 PCED1AQ9H1Q7 454 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 NMRAL1Q9HBL8 299 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 PRMT8Q9NR22 394 aaPredicted RBP13.55□□□□□ -0.24
TMEM254-213ENST00000613758 KLHL42Q9P2K6 505 aa13.55□□□□□ -0.24
TMEM254-213ENST00000613758 METTL12A8MUP2 240 aa13.54□□□□□ -0.24
TMEM254-213ENST00000613758 H0Y8X5 98 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms