RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ATXN7L2Q5T6C5 722 aaPredicted RBP16.31■□□□□ 0.2
CNOT3-208ENST00000613073 DEPDC1Q5TB30 811 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 FAM45BPQ6NSW5 357 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 OR6K2Q8NGY2 324 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 FAM45AQ8TCE6 357 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 ASB9Q96DX5 294 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 ATAD3AQ9NVI7 634 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 FAM50BQ9Y247 325 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 NOX1Q9Y5S8 564 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 DGKBQ9Y6T7 804 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 ANKRD36A6QL64 1941 aa16.31■□□□□ 0.2
CNOT3-208ENST00000613073 ABHD14A-ACY1A0A1B0GW23 586 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 K7ERQ8 282 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 C8BP07358 591 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 BMP1P13497 986 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 FMO4P31512 558 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 ZNF140P52738 457 aaPredicted RBP16.3■□□□□ 0.2
CNOT3-208ENST00000613073 RAB15P59190 212 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 RHDQ02161 417 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 ACAP2Q15057 778 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 SF3B4Q15427 424 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■■■■□ 25.6
CNOT3-208ENST00000613073 LRRC26Q2I0M4 334 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 PIWIL4Q7Z3Z4 852 aaKnown RBP16.3■□□□□ 0.2
CNOT3-208ENST00000613073 DDX53Q86TM3 631 aaKnown RBP16.3■□□□□ 0.2
CNOT3-208ENST00000613073 ISCA2Q86U28 154 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 CADM3Q8N126 398 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 NAT16Q8N8M0 369 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 KDM1BQ8NB78 822 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 BPIFB6Q8NFQ5 453 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 CANT1Q8WVQ1 401 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 PTERQ96BW5 349 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 DHRS1Q96LJ7 313 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 ADI1Q9BV57 179 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 RC3H2Q9HBD1 1191 aaKnown RBP16.3■□□□□ 0.2
CNOT3-208ENST00000613073 PCDH12Q9NPG4 1184 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 RNF103-CHMP3A0A140T963 221 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 B4GAT1O43505 415 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 ESRRBO95718 433 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 RBP1P09455 135 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 MATN1P21941 496 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 GABRR2P28476 465 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 SOX11P35716 441 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 CSKP41240 450 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 STC1P52823 247 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 CDH18Q13634 790 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 RFTN1Q14699 578 aaPredicted RBP16.3■□□□□ 0.2
CNOT3-208ENST00000613073 PLCL1Q15111 1095 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 SLC14A2Q15849 920 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 PGS1Q32NB8 556 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 TCEAL8Q8IYN2 117 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 Q8N9G6 341 aaPredicted RBP16.3■□□□□ 0.2
CNOT3-208ENST00000613073 PAWRQ96IZ0 340 aaKnown RBP16.3■□□□□ 0.2
CNOT3-208ENST00000613073 FEM1AQ9BSK4 669 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 TM6SF2Q9BZW4 377 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 CCDC68Q9H2F9 335 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 ZBTB26Q9HCK0 441 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 NLE1Q9NVX2 485 aaPredicted RBP16.3■□□□□ 0.2
CNOT3-208ENST00000613073 CDYLQ9Y232 598 aa16.3■□□□□ 0.2
CNOT3-208ENST00000613073 CKMP06732 381 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 LAG3P18627 525 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 RPS3AP61247 264 aaKnown RBP16.29■□□□□ 0.2
CNOT3-208ENST00000613073 GALNT7Q86SF2 657 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 HS6ST3Q8IZP7 471 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 CNDP1Q96KN2 507 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 CRISPLD2Q9H0B8 497 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 IL21Q9HBE4 155 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 PCDHGA7Q9Y5G6 932 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 C2orf81A6NN90 581 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 ANKRD66B4E2M5 251 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 NRG2O14511 850 aaPredicted RBP16.29■□□□□ 0.2
CNOT3-208ENST00000613073 NPHS1O60500 1241 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 BCL10O95999 233 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 FDXRP22570 491 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 EEF1B2P24534 225 aaKnown RBP16.29■□□□□ 0.2
CNOT3-208ENST00000613073 DCKP27707 260 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 GPR150Q8NGU9 434 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 TRIM43Q96BQ3 446 aaPredicted RBP16.29■□□□□ 0.2
CNOT3-208ENST00000613073 EHD1Q9H4M9 534 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 PCDHB9Q9Y5E1 797 aa16.29■□□□□ 0.2
CNOT3-208ENST00000613073 MYO7AQ13402 2215 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 GPR39O43194 453 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 SUPT7LO94864 414 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 CNPP09543 421 aaKnown RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 CCNA2P20248 432 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 IDUAP35475 653 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 DNAJB13P59910 316 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 RHOAP61586 193 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 DNASE1L3Q13609 305 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 TAF1AQ15573 450 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 TPGS1Q6ZTW0 290 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 GAREM2Q75VX8 874 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 PCYOX1LQ8NBM8 494 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 PEX13Q92968 403 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 RETREG1Q9H6L5 497 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 TUBA8Q9NY65 449 aaPredicted RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 FKBPLQ9UIM3 349 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 PRRC2BQ5JSZ5 2229 aaKnown RBP16.28■□□□□ 0.2
CNOT3-208ENST00000613073 DOCK6Q96HP0 2047 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 TGM5O43548 720 aa16.28■□□□□ 0.2
CNOT3-208ENST00000613073 GREM1O60565 184 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms