RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	GLT6D1	Q7Z4J2	308 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	ERI1	Q8IV48	349 aa	Known RBP	13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	OR4K2	Q8NGD2	314 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	OSCP1	Q8WVF1	389 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	LPGAT1	Q92604	370 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	ASB16	Q96NS5	453 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	TCF12	Q99081	682 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	ZNF576	Q9H609	170 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	CEPT1	Q9Y6K0	416 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	NOTCH4	Q99466	2003 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	UBA6	A0AVT1	1052 aa	Predicted RBP	13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614		E7ENX8	843 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	HNRNPR	O43390	633 aa	Known RBP	13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	CDK14	O94921	469 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	CD160	O95971	181 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	MT-CO1	P00395	513 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	CDK4	P11802	303 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	ZNF26	P17031	533 aa	Predicted RBP	13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	ALDH3B2	P48448	385 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	ACADVL	P49748	655 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	AP1S1	P61966	158 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	PFKFB4	Q16877	469 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	EML3	Q32P44	896 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	KIAA1191	Q96A73	305 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	TDRD1	Q9BXT4	1180 aa	Known RBP	13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	TM6SF2	Q9BZW4	377 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	MID1IP1	Q9NPA3	183 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	TAS2R13	Q9NYV9	303 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	MARK1	Q9P0L2	795 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	RAI2	Q9Y5P3	530 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	HELZ	P42694	1942 aa	Known RBP	13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	LAMA3	Q16787	3333 aa		13.72	□□□□□ -0.21
COPS7B-223	ENST00000611614	C2orf81	A6NN90	581 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	LINC01565	O15544	149 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	SIX3	O95343	332 aa	Predicted RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	IGSF6	O95976	241 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	PRL	P01236	227 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	FMO4	P31512	558 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	CDK9	P50750	372 aa	Known RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	STX1B	P61266	288 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	DHCR24	Q15392	516 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	HACD2	Q6Y1H2	254 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	GALNT4	Q8N4A0	578 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	NAT16	Q8N8M0	369 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	MDGA1	Q8NFP4	955 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	TSPAN14	Q8NG11	270 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	STAG3L4	Q8TBR4	150 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	EME1	Q96AY2	570 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	C3orf30	Q96M34	536 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	KLHL32	Q96NJ5	620 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	BIRC8	Q96P09	236 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	DERL2	Q9GZP9	239 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	CCDC68	Q9H2F9	335 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	AKTIP	Q9H8T0	292 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	LHX3	Q9UBR4	397 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	RSL24D1	Q9UHA3	163 aa	Known RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	AP4S1	Q9Y587	144 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	PCDHGC4	Q9Y5F7	938 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	ATP6AP2	A0A1C7CYW4	349 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	MRAS	O14807	208 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	AZIN1	O14977	448 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	NRP2	O60462	931 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	KERA	O60938	352 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	NDUFS3	O75489	264 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	ATP6AP2	O75787	350 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	RNASEH2A	O75792	299 aa	Known RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	SRP72	O76094	671 aa	Known RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	NFATC1	O95644	943 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	ADH5	P11766	374 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	GFAP	P14136	432 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	CDH2	P19022	906 aa	Predicted RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	POLR2E	P19388	210 aa	Known RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	TCN1	P20061	433 aa	Predicted RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	NNMT	P40261	264 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	ATP6V0D1	P61421	351 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	RAD51	Q06609	339 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	TRIM25	Q14258	630 aa	Known RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	SETMAR	Q53H47	684 aa	Predicted RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	FAM219B	Q5XKK7	198 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	PAOX	Q6QHF9	649 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	PAQR3	Q6TCH7	311 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	HM13	Q8TCT9	377 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	GAB3	Q8WWW8	586 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	RPL10L	Q96L21	214 aa	Known RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	UHRF1	Q96T88	793 aa	Predicted RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	EFHD1	Q9BUP0	239 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	ZFP14	Q9HCL3	533 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	OBP2A	Q9NY56	170 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	INTS6	Q9UL03	887 aa	Known RBP	13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	SLC8A2	Q9UPR5	921 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	MED16	Q9Y2X0	877 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	DNAJC15	Q9Y5T4	150 aa		13.71	□□□□□ -0.21
COPS7B-223	ENST00000611614	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.7	□□□□□ -0.22
COPS7B-223	ENST00000611614	LRRC14B	A6NHZ5	514 aa		13.7	□□□□□ -0.22
COPS7B-223	ENST00000611614		K7ERQ8	282 aa		13.7	□□□□□ -0.22
COPS7B-223	ENST00000611614	TRIM24	O15164	1050 aa		13.7	□□□□□ -0.22
COPS7B-223	ENST00000611614	PFDN1	O60925	122 aa		13.7	□□□□□ -0.22
COPS7B-223	ENST00000611614	H6PD	O95479	791 aa		13.7	□□□□□ -0.22
COPS7B-223	ENST00000611614	SLC5A2	P31639	672 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms