RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 LINC00615Q96LM1 132 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TMEM237Q96Q45 408 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LRRC37BQ96QE4 947 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SLC30A3Q99726 388 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 WRAP53Q9BUR4 548 aaKnown RBP12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HEBP1Q9NRV9 189 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MMP17Q9ULZ9 603 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DUSP12Q9UNI6 340 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GPR34Q9UPC5 381 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ITM2BQ9Y287 266 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DNAJC16Q9Y2G8 782 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 OARD1Q9Y530 152 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PRSS21Q9Y6M0 314 aa12.11□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DOCK9Q9BZ29 2069 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MATN2O00339 956 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HDAC3O15379 428 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ITM2AO43736 263 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SGTAO43765 313 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HNRNPCL1O60812 293 aaKnown RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ADAM23O75077 832 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ATG13O75143 517 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GPC4O75487 556 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ATP5HO75947 161 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SLCO2B1O94956 709 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 KLF8O95600 359 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RPS17P08708 135 aaKnown RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FOSL2P15408 326 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PGGT1BP53609 377 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TAS2R38P59533 333 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RPS21P63220 83 aaKnown RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SEMG2Q02383 582 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 OVGP1Q12889 678 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CDC16Q13042 620 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 IFT88Q13099 833 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TSNQ15631 228 aaKnown RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PPP1R3AQ16821 1122 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ARL13AQ5H913 290 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 METTL21CQ5VZV1 264 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SBSNQ6UWP8 590 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GPSM1Q86YR5 675 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RASGRP3Q8IV61 690 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TCAIMQ8N3R3 496 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FBXO39Q8N4B4 442 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SPATA6LQ8N4H0 392 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HDDC3Q8N4P3 179 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FAM3CQ92520 227 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SKA1Q96BD8 255 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 COX14Q96I36 57 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CDX2Q99626 313 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TUBB6Q9BUF5 446 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TMEM120AQ9BXJ8 343 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GSTO2Q9H4Y5 243 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ACTR5Q9H9F9 607 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TRIM39Q9HCM9 518 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ZDHHC4Q9NPG8 344 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GALPQ9UBC7 116 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CNOT6Q9ULM6 557 aaKnown RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DNMT3AQ9Y6K1 912 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 C5orf42Q9H799 3197 aa12.1□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 A0A0G2JND7 137 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NPEPPSL1A6NEC2 478 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TRPC5OSA6NMA1 111 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CHURC1-FNTBB4DL54 471 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SUPT3HB4E1H0 165 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CDC7O00311 574 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LIN7AO14910 233 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SNX2O60749 519 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CCDC22O60826 627 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SUPT3HO75486 399 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LYPLA1O75608 230 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TRIM16O95361 564 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 MLYCDO95822 493 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 S100BP04271 92 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FGF4P08620 206 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GFAPP14136 432 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ARRB2P32121 409 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CCR7P32248 378 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GPR1P46091 355 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 KCNC1P48547 511 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SEC13P55735 322 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 AP1S2P56377 157 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 IRX1P78414 480 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TMEM115Q12893 351 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GTF2H3Q13889 308 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PCBP2Q15366 365 aaKnown RBP eCLIP12.09□□□□□ -0.479e-10■□□□□ 8.1
NEDD8-MDP1-203ENST00000604306 TGFBIQ15582 683 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 POM121L1PQ3SYA9 428 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 GALNTL6Q49A17 601 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TMEM259Q4ZIN3 620 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SH2D4BQ5SQS7 431 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 ANKS6Q68DC2 871 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RAET1GQ6H3X3 334 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 PTCRAQ6ISU1 281 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CYHR1Q6ZMK1 362 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 FRA10AC1Q70Z53 315 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 TMPRSS6Q8IU80 811 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LSMEM2Q8N112 164 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 DENND6BQ8NEG7 585 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms