RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ZNF225Q9UK10 706 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 BRWD1Q9NSI6 2320 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 PLXNB3Q9ULL4 1909 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 COL6A3P12111 3177 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 PRRT4C9JH25 899 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 H0Y3Z8 333 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 SNX2O60749 519 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 ADSLP30566 484 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 TXNDC11Q6PKC3 985 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 DEFB107AQ8IZN7 70 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 ZBTB2Q8N680 514 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 SMRP1Q8NCR6 262 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 RP9Q8TA86 221 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 TWIST2Q8WVJ9 160 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 SMARCD2Q92925 531 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 FBRSL1Q9HCM7 1045 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 CD207Q9UJ71 328 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 ADAMTS6Q9UKP5 1117 aa16.81■□□□□ 0.28
SHKBP1-216ENST00000598201 TSPAN11A1L157 253 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 E2F3O00716 465 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 AIM2O14862 343 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 PIP5K1BO14986 540 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 SORBS2O94875 1100 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 FSHRP23945 695 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 VIPR1P32241 457 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 NSG1P42857 185 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 CYLC2Q14093 348 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 ATAT1Q5SQI0 421 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 SYVN1Q86TM6 617 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 SFTPA1Q8IWL2 248 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 KIRREL3Q8IZU9 778 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 EFCAB3Q8N7B9 438 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 SCAMP4Q969E2 229 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 PANX3Q96QZ0 392 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 COPS8Q99627 209 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 GIMAP2Q9UG22 337 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 SLC27A6Q9Y2P4 619 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 PIKFYVEQ9Y2I7 2098 aa16.8■□□□□ 0.28
SHKBP1-216ENST00000598201 HEPACAM2A8MVW5 462 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 UBDO15205 165 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 SRPRAP08240 638 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 ARHGEF7Q14155 803 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 GET4Q7L5D6 327 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 ADAMTSL2Q86TH1 951 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 ENDOVQ8N8Q3 282 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 SNX31Q8N9S9 440 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 WFIKKN2Q8TEU8 576 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 DLG3Q92796 817 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 RCN3Q96D15 328 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 HGH1Q9BTY7 390 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 AKTIPQ9H8T0 292 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 ELOVL2Q9NXB9 296 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 NUDT4Q9NZJ9 180 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 BTRCQ9Y297 605 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 TIMM22Q9Y584 194 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 IGLV3-16A0A075B6K0 115 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 KRT36O76013 467 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 PDE5AO76074 875 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 ASLP04424 464 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 DGKAP23743 735 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 VASPP50552 380 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 NUDT2P50583 147 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 HERC3Q15034 1050 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 ZNF805Q5CZA5 627 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 PGM2L1Q6PCE3 622 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 RIPOR1Q6ZS17 1223 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 GK5Q6ZS86 529 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 Q6ZVL8 140 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 FRA10AC1Q70Z53 315 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 NET1Q7Z628 596 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 KIAA1958Q8N8K9 716 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 SPATA16Q9BXB7 569 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 SPATS2LQ9NUQ6 558 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 PKD2L2Q9NZM6 624 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 SLC8A2Q9UPR5 921 aa16.79■□□□□ 0.28
SHKBP1-216ENST00000598201 ALDOCP09972 364 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 CYP2A6P11509 494 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 ZNF30P17039 623 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 ETV3P41162 512 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 RGS4P49798 205 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 ERFP50548 548 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 METAP1P53582 386 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 RALGDSQ12967 914 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 PHKG1Q16816 387 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 ZDHHC20Q5W0Z9 365 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 MYO1HQ8N1T3 1032 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 RIPOR3Q96MK2 946 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 FAM83CQ9BQN1 747 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 SARDHQ9UL12 918 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 TMCO1Q9UM00 188 aa16.78■□□□□ 0.28
SHKBP1-216ENST00000598201 C16orf96A6NNT2 1141 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 FFAR2O15552 330 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 GPC4O75487 556 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 NFATC1O95644 943 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 LINC00032P0C843 101 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 HLA-EP13747 358 aa16.77■□□□□ 0.28
SHKBP1-216ENST00000598201 FCARP24071 287 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms