RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TAAR2Q9P1P5 351 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 SPASTQ9UBP0 616 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.4□□□□□ -0.74
LIG1-210ENST00000596332 MOSPD1Q9UJG1 213 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 FBXO5Q9UKT4 447 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 WDR37Q9Y2I8 494 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 GPSM3Q9Y4H4 160 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 DNMT3AQ9Y6K1 912 aaPredicted RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 V9GYY5 206 aaPredicted RBP10.4□□□□□ -0.74
LIG1-210ENST00000596332 SPEGQ15772 3267 aa10.4□□□□□ -0.74
LIG1-210ENST00000596332 PRAMEF33A0A0G2JMD5 474 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 SLC5A10A0PJK1 596 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 MGAT4DA6NG13 374 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 KMOO15229 486 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 DKK1O94907 266 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 ACP5P13686 325 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 MSH3P20585 1137 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 PDHA2P29803 388 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 CCR7P32248 378 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 PGGT1BP53609 377 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 VSNL1P62760 191 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 LRP8Q14114 963 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 NFE2L1Q14494 772 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 GBX1Q14549 363 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 UAP1L1Q3KQV9 507 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 PLA2G4EQ3MJ16 856 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 LYPLAL1Q5VWZ2 237 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 METRNLQ641Q3 311 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 LVRNQ6Q4G3 990 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 ABRAXAS1Q6UWZ7 409 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 NAPRTQ6XQN6 538 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 C3orf62Q6ZUJ4 267 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 GALNT7Q86SF2 657 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 CCDC25Q86WR0 208 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 GALNT13Q8IUC8 556 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 SLC35F3Q8IY50 421 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 KRT222Q8N1A0 295 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 SDR16C5Q8N3Y7 309 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 FSTL5Q8N475 847 aaPredicted RBP10.39□□□□□ -0.75
LIG1-210ENST00000596332 FAM181AQ8N9Y4 354 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 OR2L2Q8NH16 312 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 GSDMBQ8TAX9 411 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 GDAP1Q8TB36 358 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 NETO1Q8TDF5 533 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 HEXDCQ8WVB3 486 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 SCG3Q8WXD2 468 aaKnown RBP10.39□□□□□ -0.75
LIG1-210ENST00000596332 FMO2Q99518 471 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 TIMM29Q9BSF4 260 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 CDC42EP4Q9H3Q1 356 aaKnown RBP10.39□□□□□ -0.75
LIG1-210ENST00000596332 PRDM8Q9NQV8 689 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 FBXO6Q9NRD1 293 aaPredicted RBP10.39□□□□□ -0.75
LIG1-210ENST00000596332 KLC4Q9NSK0 619 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 NLGN3Q9NZ94 848 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 KCNK6Q9Y257 313 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 CRYL1Q9Y2S2 319 aa10.39□□□□□ -0.75
LIG1-210ENST00000596332 TDRD6O60522 2096 aaKnown RBP10.38□□□□□ -0.75
LIG1-210ENST00000596332 COL5A1P20908 1838 aaPredicted RBP10.38□□□□□ -0.75
LIG1-210ENST00000596332 C17orf113A0A1B0GUU1 675 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 HMX2A2RU54 273 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 PRMT5O14744 637 aaPredicted RBP10.38□□□□□ -0.75
LIG1-210ENST00000596332 GIPC1O14908 333 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 FFAR2O15552 330 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 FLRT2O43155 660 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 GPC4O75487 556 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 AP2A2O94973 939 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 GSTA2P09210 222 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 PAMP19021 973 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 FMO4P31512 558 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 ABCG1P45844 678 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 TTPAP49638 278 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 CSRP3P50461 194 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 ATXN3P54252 364 aaPredicted RBP10.38□□□□□ -0.75
LIG1-210ENST00000596332 MGAT5Q09328 741 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 CLCA4Q14CN2 919 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 ELOCQ15369 112 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 RSPO4Q2I0M5 234 aaPredicted RBP10.38□□□□□ -0.75
LIG1-210ENST00000596332 C6orf132Q5T0Z8 1188 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 ZNF470Q6ECI4 717 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 CAPRIN2Q6IMN6 1127 aaKnown RBP10.38□□□□□ -0.75
LIG1-210ENST00000596332 MRNIPQ6NTE8 343 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 WDR93Q6P2C0 686 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 ZNF449Q6P9G9 518 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 IYDQ6PHW0 289 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 SLC30A9Q6PML9 568 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 WASH2PQ6VEQ5 465 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 CAPN12Q6ZSI9 719 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 TAF8Q7Z7C8 310 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 RASGRP3Q8IV61 690 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 VRK3Q8IV63 474 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 NAXDQ8IW45 347 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 GIMAP7Q8NHV1 300 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 FBF1Q8TES7 1133 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 ZNF514Q96K75 400 aaPredicted RBP10.38□□□□□ -0.75
LIG1-210ENST00000596332 APOLD1Q96LR9 279 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 CCM2Q9BSQ5 444 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 OR52A5Q9H2C5 316 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 WASH6PQ9NQA3 447 aa10.38□□□□□ -0.75
LIG1-210ENST00000596332 ZNF624Q9P2J8 865 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms