RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SLC29A1Q99808 456 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 SLC39A3Q9BRY0 314 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 PRKD2Q9BZL6 878 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 WDR12Q9GZL7 423 aaKnown RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 MUC3BQ9H195 1237 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 GPN2Q9H9Y4 310 aaPredicted RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 TBC1D14Q9P2M4 693 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 A0A1W2PRU2 124 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 GFRA2O00451 464 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 AREL1O15033 823 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 TRIM13O60858 407 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 LATS1O95835 1130 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 C1RP00736 705 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 SLC35E2BP0CK96 405 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 RPL10P27635 214 aaKnown RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 CTNNB1P35222 781 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 OPRL1P41146 370 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 CSRP3P50461 194 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 NUDT2P50583 147 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 SLC12A1Q13621 1099 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 ATAD3BQ5T9A4 648 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 NAPRTQ6XQN6 538 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 RNF135Q8IUD6 432 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 CARNMT1Q8N4J0 409 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 TTC30BQ8N4P2 665 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 MRPS31Q92665 395 aaKnown RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 TP53INP1Q96A56 240 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 FEM1CQ96JP0 617 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 SCYL1Q96KG9 808 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 PSKH2Q96QS6 385 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 C17orf80Q9BSJ5 609 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 CINPQ9BW66 212 aaPredicted RBP15.22■□□□□ 0.03
PNKP-204ENST00000594661 C1QTNF1Q9BXJ1 281 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 POLR1BQ9H9Y6 1135 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 HMG20AQ9NP66 347 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 MID2Q9UJV3 735 aa15.22■□□□□ 0.03
PNKP-204ENST00000594661 FAM95CA0A1B0GW59 222 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.21■□□□□ 0.03
PNKP-204ENST00000594661 TK2O00142 265 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 CCL16O15467 120 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 TLL1O43897 1013 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 MTRF1O75570 445 aaKnown RBP15.21■□□□□ 0.03
PNKP-204ENST00000594661 ALX3O95076 343 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 HSPA4LO95757 839 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 APOA4P06727 396 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 CKMP06732 381 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 HSPA1AP0DMV8 641 aaKnown RBP15.21■□□□□ 0.03
PNKP-204ENST00000594661 HSPA1BP0DMV9 641 aaKnown RBP15.21■□□□□ 0.03
PNKP-204ENST00000594661 PRKCAP17252 672 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 GLRBP48167 497 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 ARF5P84085 180 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 GALNT3Q14435 633 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 SUZ12Q15022 739 aaKnown RBP15.21■□□□□ 0.03
PNKP-204ENST00000594661 TSTD2Q5T7W7 516 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 PSRC1Q6PGN9 363 aaPredicted RBP15.21■□□□□ 0.03
PNKP-204ENST00000594661 CCDC149Q6ZUS6 474 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 C7orf61Q8IZ16 206 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 PGAM4Q8N0Y7 254 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 OR13F1Q8NGS4 319 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 OR13J1Q8NGT2 312 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 WFDC5Q8TCV5 224 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 KCTD4Q8WVF5 259 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 ARMC1Q9NVT9 282 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 SUCOQ9UBS9 1254 aaKnown RBP15.21■□□□□ 0.03
PNKP-204ENST00000594661 RUVBL2Q9Y230 463 aaKnown RBP15.21■□□□□ 0.03
PNKP-204ENST00000594661 ST14Q9Y5Y6 855 aa15.21■□□□□ 0.03
PNKP-204ENST00000594661 H0Y626 953 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 ICMTO60725 284 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 CPNE6O95741 557 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 CD160O95971 181 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 SERPINF2P08697 491 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 STMN1P16949 149 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 SYN1P17600 705 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 RAB10P61026 200 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 CTAG1AP78358 180 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 ZNF460Q14592 562 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 PERM1Q5SV97 790 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 LINGO4Q6UY18 593 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 LINC00299Q6ZSB3 139 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 BTLAQ7Z6A9 289 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 AKAP14Q86UN6 197 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 MFSD6LQ8IWD5 586 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 MFSD2AQ8NA29 543 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 HJURPQ8NCD3 748 aaPredicted RBP15.2■□□□□ 0.02
PNKP-204ENST00000594661 C2CD4AQ8NCU7 369 aaPredicted RBP15.2■□□□□ 0.02
PNKP-204ENST00000594661 ABHD11Q8NFV4 315 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 ELMO2Q96JJ3 720 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 LENG8Q96PV6 779 aaPredicted RBP15.2■□□□□ 0.02
PNKP-204ENST00000594661 AKIP1Q9NQ31 210 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 HCFC1R1Q9NWW0 138 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 ACOT9Q9Y305 439 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 KCTD3Q9Y597 815 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 ANGPTL3Q9Y5C1 460 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 MROH6A6NGR9 719 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 CCL22O00626 93 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 AIM2O14862 343 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 ACOX3O15254 700 aa15.2■□□□□ 0.02
PNKP-204ENST00000594661 HOXC11O43248 304 aaPredicted RBP15.2■□□□□ 0.02
PNKP-204ENST00000594661 H2AFYO75367 372 aaKnown RBP15.2■□□□□ 0.02
PNKP-204ENST00000594661 GLUD1P00367 558 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms