RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 EPHX3Q9H6B9 360 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 THAP1Q9NVV9 213 aa20.48■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3DA0A087WVF3 549 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3IA0A087WXS9 549 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3EA0A087X179 549 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3KA0A087X1G2 549 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 NPEPPSL1A6NEC2 478 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3FA6NER0 549 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 PRR23AA6NEV1 266 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 OR2AG2A6NM03 316 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 A8MT66 165 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3LB9A6J9 549 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 EIF3FO00303 357 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 SNX3O60493 162 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 FTH1P02794 183 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3HP0C7X1 549 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 CBSLP0DN79 551 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 TEAD1P28347 426 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 CBSP35520 551 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 CTSCP53634 463 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 DNAJB13P59910 316 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 NFKB2Q00653 900 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 GAS6Q14393 721 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 UBXN2BQ14CS0 331 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 ACSBG2Q5FVE4 666 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 GKAP1Q5VSY0 366 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3GQ6DHY5 549 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3CQ6IPX1 549 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 PIWIL4Q7Z3Z4 852 aaKnown RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 TBC1D3Q8IZP1 549 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 TP53I13Q8NBR0 393 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 HMGB4Q8WW32 186 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 FUBP1Q96AE4 644 aaKnown RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 HIC2Q96JB3 615 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 LENG8Q96PV6 779 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 ZNF395Q9H8N7 513 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 TRIM39Q9HCM9 518 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 IPO13O94829 963 aaKnown RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 PAK4O96013 591 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 PCCBP05166 539 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 MTHFD2P13995 350 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 SLC1A6P48664 564 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 ASPHQ12797 758 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 SGCGQ13326 291 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 IRF4Q15306 451 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 ADGRG6Q86SQ4 1221 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 FAM124AQ86V42 546 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 SIX5Q8N196 739 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 BEND7Q8N7W2 519 aaPredicted RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 NELL2Q99435 816 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 SLC17A9Q9BYT1 436 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 FOXQ1Q9C009 403 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 MBNL1Q9NR56 388 aaKnown RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 USP36Q9P275 1121 aaKnown RBP20.47■□□□□ 0.87
PNKP-203ENST00000593946 RNF112Q9ULX5 631 aa20.47■□□□□ 0.87
PNKP-203ENST00000593946 KPNA5O15131 536 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 ITM2AO43736 263 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 CDK14O94921 469 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 ARRB2P32121 409 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 NAGLUP54802 743 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 ABCE1P61221 599 aaKnown RBP20.46■□□□□ 0.87
PNKP-203ENST00000593946 PPP2CBP62714 309 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 PPP2CAP67775 309 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 BCL7AQ4VC05 210 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 PLEKHS1Q5SXH7 462 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 HEATR4Q86WZ0 1026 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 SLC22A9Q8IVM8 553 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 UBALD2Q8IYN6 164 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 MYO1HQ8N1T3 1032 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 KLK6Q92876 244 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 OR2AG1Q9H205 316 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 ITM2CQ9NQX7 267 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 C2orf42Q9NWW7 574 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 EBF1Q9UH73 591 aa20.46■□□□□ 0.87
PNKP-203ENST00000593946 FAM170BA6NMN3 283 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 SYCE1LA8MT33 242 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 TMEM114B3SHH9 223 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 UBXN8O00124 270 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 VEGFDO43915 354 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 ATG13O75143 517 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 SMIM24O75264 130 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 LYPLA1O75608 230 aaPredicted RBP20.45■□□□□ 0.86
PNKP-203ENST00000593946 TPBGLP0DKB5 382 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 ENO3P13929 434 aaPredicted RBP20.45■□□□□ 0.86
PNKP-203ENST00000593946 ACSL1P33121 698 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 TRIM23P36406 574 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 CDK3Q00526 305 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 OVGP1Q12889 678 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 ATG14Q6ZNE5 492 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 TRIM67Q6ZTA4 783 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 SPATA21Q7Z572 469 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 ASB12Q8WXK4 309 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 SEC16BQ96JE7 1060 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 SORT1Q99523 831 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 C1QTNF7Q9BXJ2 289 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 TEX101Q9BY14 249 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 ATXN10Q9UBB4 475 aa20.45■□□□□ 0.86
PNKP-203ENST00000593946 LILRB5O75023 590 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 TGDSO95455 350 aa20.44■□□□□ 0.86
PNKP-203ENST00000593946 IGLV3-19P01714 112 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms