RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PEX6Q13608 980 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 PCID2Q5JVF3 399 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 LDLRAP1Q5SW96 308 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 ZCCHC8Q6NZY4 707 aaKnown RBP19.36■□□□□ 0.69
LSM4-203ENST00000593829 ZNF534Q76KX8 674 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 ADGRG6Q86SQ4 1221 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 MCUQ8NE86 351 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 PPHLN1Q8NEY8 458 aaKnown RBP19.36■□□□□ 0.69
LSM4-203ENST00000593829 GPBAR1Q8TDU6 330 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 CKAP2Q8WWK9 683 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 CDKN2AIPNLQ96HQ2 116 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 RIMKLBQ9ULI2 386 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 C15orf41Q9Y2V0 281 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 SLC30A1Q9Y6M5 507 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 COL5A1P20908 1838 aaPredicted RBP19.36■□□□□ 0.69
LSM4-203ENST00000593829 CCDC78A2IDD5 438 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 MTX2O75431 263 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 UBOX5O94941 541 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 ZNF8P17098 575 aaPredicted RBP19.35■□□□□ 0.69
LSM4-203ENST00000593829 ITGALP20701 1170 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 CCND1P24385 295 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 PSMA3P25788 255 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 MC4RP32245 332 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 CLNS1AP54105 237 aaKnown RBP19.35■□□□□ 0.69
LSM4-203ENST00000593829 CALCOCO2Q13137 446 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 PROX2Q3B8N5 592 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 SNX20Q7Z614 316 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 PPIL6Q8IXY8 311 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 FAM181AQ8N9Y4 354 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 DDHD1Q8NEL9 900 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 GSDMCQ9BYG8 508 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 ARL2BPQ9Y2Y0 163 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 MYLKQ15746 1914 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 TMEM63AO94886 807 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 CAV1Q03135 178 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 LRP8Q14114 963 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 C6orf132Q5T0Z8 1188 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 GPRC6AQ5T6X5 926 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 TSTD2Q5T7W7 516 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 TBC1D1Q86TI0 1168 aaPredicted RBP19.35■□□□□ 0.69
LSM4-203ENST00000593829 CCL4L1Q8NHW4 92 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 PEX13Q92968 403 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 ULK4Q96C45 1275 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 APOLD1Q96LR9 279 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 TTC25Q96NG3 672 aa19.35■□□□□ 0.69
LSM4-203ENST00000593829 ZCCHC2Q9C0B9 1178 aaKnown RBP19.35■□□□□ 0.69
LSM4-203ENST00000593829 XAB2Q9HCS7 855 aaKnown RBP19.35■□□□□ 0.69
LSM4-203ENST00000593829 NOP53Q9NZM5 478 aaKnown RBP19.35■□□□□ 0.69
LSM4-203ENST00000593829 ZNF106Q9H2Y7 1883 aaKnown RBP19.34■□□□□ 0.69
LSM4-203ENST00000593829 PCNX2A6NKB5 2137 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 SMIM23A6NLE4 172 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 GRID2O43424 1007 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 CDK14O94921 469 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 MLNP12872 115 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 CKMT2P17540 419 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 MGAT1P26572 445 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 CA5AP35218 305 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 CTBSQ01459 385 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 TMEM115Q12893 351 aaPredicted RBP19.34■□□□□ 0.69
LSM4-203ENST00000593829 GTF2H3Q13889 308 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 GPR33Q49SQ1 333 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 KHDC1Q4VXA5 237 aaKnown RBP19.34■□□□□ 0.69
LSM4-203ENST00000593829 PCGF5Q86SE9 256 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 NAT8LQ8N9F0 302 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 OR13J1Q8NGT2 312 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 GRAMD1AQ96CP6 724 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 ANKRD27Q96NW4 1050 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 BOCQ9BWV1 1114 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 CDC42EP4Q9H3Q1 356 aaKnown RBP19.34■□□□□ 0.69
LSM4-203ENST00000593829 CHRAC1Q9NRG0 131 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 NCKIPSDQ9NZQ3 722 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 CRLS1Q9UJA2 301 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 GPR34Q9UPC5 381 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 PRKAB1Q9Y478 270 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 BPTFQ12830 3046 aa19.34■□□□□ 0.69
LSM4-203ENST00000593829 AGAP14A8MT82 685 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 DNALI1O14645 258 aaPredicted RBP19.33■□□□□ 0.69
LSM4-203ENST00000593829 WFS1O76024 890 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 CRADDP78560 199 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 ZRANB3Q5FWF4 1079 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 UBAP2Q5T6F2 1119 aaKnown RBP19.33■□□□□ 0.69
LSM4-203ENST00000593829 RNASEH2BQ5TBB1 312 aaKnown RBP19.33■□□□□ 0.69
LSM4-203ENST00000593829 ASRGL1Q7L266 308 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 CAND1Q86VP6 1230 aaKnown RBP19.33■□□□□ 0.69
LSM4-203ENST00000593829 NRROSQ86YC3 692 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 FAM46DQ8NEK8 389 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 GLMNQ92990 594 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 ZNF778Q96MU6 729 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 LGALS13Q9UHV8 139 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 PCYT1BQ9Y5K3 369 aaPredicted RBP19.33■□□□□ 0.69
LSM4-203ENST00000593829 ACTL7BQ9Y614 415 aa19.33■□□□□ 0.69
LSM4-203ENST00000593829 GOLGA8MH3BSY2 632 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 TP73O15350 636 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 AVILO75366 819 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 AK4P27144 223 aaPredicted RBP19.33■□□□□ 0.68
LSM4-203ENST00000593829 ARSDP51689 593 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 DAB2P98082 770 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 ACVR1Q04771 509 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 DNAJC3Q13217 504 aa19.33■□□□□ 0.68
LSM4-203ENST00000593829 CHST15Q7LFX5 561 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms