RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PIPSLA2A3N6 862 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 BTNL10A8MVZ5 291 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 PPP1R12AO14974 1030 aaPredicted RBP14.46□□□□□ -0.09
PNKP-202ENST00000593706 SPAG6O75602 509 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 CREG1O75629 220 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 FURINP09958 794 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 FGF5P12034 268 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 BRAFP15056 766 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 ZFXP17010 805 aaPredicted RBP14.46□□□□□ -0.09
PNKP-202ENST00000593706 BPIP17213 487 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 CYLC1P35663 651 aaPredicted RBP14.46□□□□□ -0.09
PNKP-202ENST00000593706 PMS2P54278 862 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 MLLT10P55197 1068 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 CDK18Q07002 472 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 TUBB3Q13509 450 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 DNASE1L3Q13609 305 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 PDK1Q15118 436 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 SPA17Q15506 151 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 FAM182AQ5T1J6 154 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 SPOCD1Q6ZMY3 1216 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 TMC3Q7Z5M5 1100 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 TMEM135Q86UB9 458 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 TMTC1Q8IUR5 882 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 ZNF547Q8IVP9 402 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 CT55Q8WUE5 264 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 KRT35Q92764 455 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 LACRTQ9GZZ8 138 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 PDE7BQ9NP56 450 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 PADI1Q9ULC6 663 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 DUSP10Q9Y6W6 482 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 HIVEP3Q5T1R4 2406 aa14.46□□□□□ -0.09
PNKP-202ENST00000593706 CRYBG3Q68DQ2 2970 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 hCG_1818297A0A087WSY0 165 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 CLEC18AA5D8T8 446 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 K7EM74 188 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 PECAM1P16284 738 aaPredicted RBP14.45□□□□□ -0.1
PNKP-202ENST00000593706 NELFEP18615 380 aaKnown RBP14.45□□□□□ -0.1
PNKP-202ENST00000593706 CDC25BP30305 580 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 TNNT3P45378 269 aaPredicted RBP14.45□□□□□ -0.1
PNKP-202ENST00000593706 ARL4DP49703 201 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 NOTCH2Q04721 2471 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 PLCL1Q15111 1095 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.45□□□□□ -0.1
PNKP-202ENST00000593706 ATP13A5Q4VNC0 1218 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 KHDC1Q4VXA5 237 aaKnown RBP14.45□□□□□ -0.1
PNKP-202ENST00000593706 ODF2Q5BJF6 829 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 AGAP9Q5VTM2 703 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 ABRAXAS1Q6UWZ7 409 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 CLEC18BQ6UXF7 455 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 SIDT2Q8NBJ9 832 aaKnown RBP14.45□□□□□ -0.1
PNKP-202ENST00000593706 CLEC18CQ8NCF0 446 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 SPATA22Q8NHS9 363 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 KLHL6Q8WZ60 621 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 VPS35Q96QK1 796 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 MAK16Q9BXY0 300 aaKnown RBP14.45□□□□□ -0.1
PNKP-202ENST00000593706 ZCCHC2Q9C0B9 1178 aaKnown RBP14.45□□□□□ -0.1
PNKP-202ENST00000593706 SLC25A51Q9H1U9 297 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 ACTL8Q9H568 366 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 BPIFA1Q9NP55 256 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 LHX9Q9NQ69 397 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 SAE1Q9UBE0 346 aaPredicted RBP14.45□□□□□ -0.1
PNKP-202ENST00000593706 TLK1Q9UKI8 766 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 RARRES3Q9UL19 164 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 MYO9AB2RTY4 2548 aa14.45□□□□□ -0.1
PNKP-202ENST00000593706 BLACEA4D250 179 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 GOLGA6L3A6NEY3 463 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 C21orf140B9A014 251 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 PJA2O43164 708 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 PMPCBO75439 489 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 TIAF1O95411 115 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 NDST3O95803 873 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 MT-CYBP00156 380 aaPredicted RBP14.44□□□□□ -0.1
PNKP-202ENST00000593706 TNNT1P13805 278 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 CTNNA1P35221 906 aaKnown RBP14.44□□□□□ -0.1
PNKP-202ENST00000593706 NR2C2P49116 596 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 PPP1CAP62136 330 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 DYNLT1P63172 113 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 TMEM115Q12893 351 aaPredicted RBP14.44□□□□□ -0.1
PNKP-202ENST00000593706 SLC14A2Q15849 920 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 KLHL35Q6PF15 583 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 WASH2PQ6VEQ5 465 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 RFX6Q8HWS3 928 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 EFCAB3Q8N7B9 438 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 LRRC57Q8N9N7 239 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 ACRBPQ8NEB7 543 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 GPR150Q8NGU9 434 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 SEC14L1Q92503 715 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 UBXN4Q92575 508 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 SRPK1Q96SB4 655 aaKnown RBP14.44□□□□□ -0.1
PNKP-202ENST00000593706 LRRC4CQ9HCJ2 640 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 LUC7LQ9NQ29 371 aaKnown RBP14.44□□□□□ -0.1
PNKP-202ENST00000593706 WASH6PQ9NQA3 447 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 EPHA6Q9UF33 1036 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 PCDHGA6Q9Y5G7 932 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 SPO11Q9Y5K1 396 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 SEC16AO15027 2179 aa14.44□□□□□ -0.1
PNKP-202ENST00000593706 FER1L5A0AVI2 2057 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 IGHV5-51A0A0C4DH38 117 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 AURKAO14965 403 aa14.43□□□□□ -0.1
PNKP-202ENST00000593706 CST8O60676 142 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms