RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 NIPSNAP2O75323 286 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 AP2A2O94973 939 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 BPGMP07738 259 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 RALBP11234 206 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 ACADMP11310 421 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 ZNF37AP17032 561 aaPredicted RBP13.29□□□□□ -0.28
VMP1-217ENST00000593168 CHRM3P20309 590 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 GMPRP36959 345 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 MPLP40238 635 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 DGKEP52429 567 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 RPS21P63220 83 aaKnown RBP13.29□□□□□ -0.28
VMP1-217ENST00000593168 B4GALNT1Q00973 533 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 DLG1Q12959 904 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 CSHL1Q14406 222 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 PDK4Q16654 411 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 MAP7D1Q3KQU3 841 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 KIAA1161Q6NSJ0 714 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 KLC3Q6P597 504 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 PAQR3Q6TCH7 311 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 TRIM42Q8IWZ5 723 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 NKAPQ8N5F7 415 aaKnown RBP13.29□□□□□ -0.28
VMP1-217ENST00000593168 RDH11Q8TC12 318 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 ANKRD49Q8WVL7 239 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 INPP5DQ92835 1189 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 GLYATL1Q969I3 302 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 NXNL1Q96CM4 212 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 DCUN1D1Q96GG9 259 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 ZC3H10Q96K80 434 aaKnown RBP13.29□□□□□ -0.28
VMP1-217ENST00000593168 SLC6A17Q9H1V8 727 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 PREBQ9HCU5 417 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 TRMT6Q9UJA5 497 aaKnown RBP13.29□□□□□ -0.28
VMP1-217ENST00000593168 COQ6Q9Y2Z9 468 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 DHRS7Q9Y394 339 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 PRSS21Q9Y6M0 314 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 WDFY3Q8IZQ1 3526 aa13.29□□□□□ -0.28
VMP1-217ENST00000593168 BAHCC1Q9P281 2608 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 SPEGQ15772 3267 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 ZZEF1O43149 2961 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 TCRBV21S2A2A0A5A6 115 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 GMNCA6NCL1 334 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 IGLON5A6NGN9 336 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 C1QTNF9BB2RNN3 333 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 TARM1B6A8C7 271 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 E5RI56 91 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 QSOX1O00391 747 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 SOD1P00441 154 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 RBP1P09455 135 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 OR56A5P0C7T3 313 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 C1QTNF9P0C862 333 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 CCDC166P0CW27 439 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 ATP1B2P14415 290 aaPredicted RBP13.28□□□□□ -0.28
VMP1-217ENST00000593168 GABRG2P18507 467 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 NDUFV2P19404 249 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 TEAD1P28347 426 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 GPR1P46091 355 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 CLCN7P51798 805 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 ADPRHP54922 357 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 ACAP2Q15057 778 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 TERF2Q15554 542 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 PLK5Q496M5 336 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 LRRC8EQ6NSJ5 796 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 PIM3Q86V86 326 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 FSTL5Q8N475 847 aaPredicted RBP13.28□□□□□ -0.28
VMP1-217ENST00000593168 TMEM151AQ8N4L1 468 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 CLDN19Q8N6F1 224 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 CCDC63Q8NA47 563 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 OR14C36Q8NHC7 312 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 CD200R1Q8TD46 325 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 ASB12Q8WXK4 309 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 PDLIM5Q96HC4 596 aaKnown RBP13.28□□□□□ -0.28
VMP1-217ENST00000593168 ZNF317Q96PQ6 595 aaPredicted RBP13.28□□□□□ -0.28
VMP1-217ENST00000593168 PANX3Q96QZ0 392 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 MRPL57Q9BQC6 102 aaKnown RBP13.28□□□□□ -0.28
VMP1-217ENST00000593168 C1QTNF2Q9BXJ5 285 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 DUSP15Q9H1R2 295 aaPredicted RBP13.28□□□□□ -0.28
VMP1-217ENST00000593168 EPN3Q9H201 632 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 MRPL46Q9H2W6 279 aaKnown RBP13.28□□□□□ -0.28
VMP1-217ENST00000593168 SIRPGQ9P1W8 387 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 COPG2Q9UBF2 871 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 CNOT6Q9ULM6 557 aaKnown RBP13.28□□□□□ -0.28
VMP1-217ENST00000593168 PCDHGA5Q9Y5G8 931 aa13.28□□□□□ -0.28
VMP1-217ENST00000593168 TRPM6Q9BX84 2022 aa13.27□□□□□ -0.28
VMP1-217ENST00000593168 CCDC189A1A4V9 331 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 WDR91A4D1P6 747 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 IQCF5A8MTL0 148 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 KLF11O14901 512 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 GIPC1O14908 333 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 DNAJC6O75061 913 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 SLC25A14O95258 325 aaPredicted RBP13.27□□□□□ -0.29
VMP1-217ENST00000593168 CPA3P15088 417 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 CD1DP15813 335 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 TAC1P20366 129 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 MSH3P20585 1137 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 AKT1P31749 480 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 ATP6V0D1P61421 351 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 IRX4P78413 519 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 TMEM259Q4ZIN3 620 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 RAET1GQ6H3X3 334 aa13.27□□□□□ -0.29
VMP1-217ENST00000593168 KIAA1324Q6UXG2 1013 aaKnown RBP13.27□□□□□ -0.29
VMP1-217ENST00000593168 ADAMTSL4Q6UY14 1074 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms