RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CROCCQ5TZA2 2017 aa8.41□□□□□ -1.06
SDF2-204ENST00000587338 GRID2O43424 1007 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 CPNE3O75131 537 aaKnown RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 PEX11BO96011 259 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 EBLN1P0CF75 366 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 ZNF30P17039 623 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 XRCC1P18887 633 aaPredicted RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 LPOP22079 712 aaPredicted RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 SLC19A1P41440 591 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 ARL4DP49703 201 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 STC1P52823 247 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 PPP1CAP62136 330 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 ETF1P62495 437 aaKnown RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 OGDHQ02218 1023 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 LAMB3Q13751 1172 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 GPR18Q14330 331 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 PLEKHN1Q494U1 663 aaPredicted RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 FAM69BQ5VUD6 431 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 CRTC3Q6UUV7 619 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 ZNF662Q6ZS27 426 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 MON1BQ7L1V2 547 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 NLRP8Q86W28 1048 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 PHF13Q86YI8 300 aaPredicted RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 TMEM126BQ8IUX1 230 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 MCEMP1Q8IX19 187 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 MCOLN2Q8IZK6 566 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 SLC35F6Q8N357 371 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 TTC30BQ8N4P2 665 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.4□□□□□ -1.06
SDF2-204ENST00000587338 SLC35G2Q8TBE7 412 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 TRIM11Q96F44 468 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 ALS2CR12Q96Q35 445 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 MLPHQ9BV36 600 aaPredicted RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 SNRNP25Q9BV90 132 aaKnown RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 ILKAPQ9H0C8 392 aaPredicted RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 OR2AG1Q9H205 316 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 ARFGAP3Q9NP61 516 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 WASH6PQ9NQA3 447 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 FGF21Q9NSA1 209 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 ZNF624Q9P2J8 865 aaPredicted RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 PCSK1NQ9UHG2 260 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 CNOT6Q9ULM6 557 aaKnown RBP8.4□□□□□ -1.06
SDF2-204ENST00000587338 NENFQ9UMX5 172 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 SNX7Q9UNH6 387 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 B3GNT3Q9Y2A9 372 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 DNAJC16Q9Y2G8 782 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 PPIL1Q9Y3C6 166 aa8.4□□□□□ -1.06
SDF2-204ENST00000587338 NIPBLQ6KC79 2804 aaeCLIP8.39□□□□□ -1.07
SDF2-204ENST00000587338 IGHV5-51A0A0C4DH38 117 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 A0A0J9YYE9 177 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 TCRBV5S1A1TA0A578 114 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 OR52A4PA6NMU1 304 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 FADS2P1A8MWK0 482 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 NUAK1O60285 661 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 SCRG1O75711 98 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 CLDN7O95471 211 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 TRBC1P01850 177 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 TUBB4AP04350 444 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 MYBL1P10243 752 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 ZNF8P17098 575 aaPredicted RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 PSMA2P25787 234 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 RPL10P27635 214 aaKnown RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 MMP13P45452 471 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 PER3P56645 1201 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 ACY1Q03154 408 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 ITKQ08881 620 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 GPS2Q13227 327 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 DPYSQ14117 519 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 INSCQ1MX18 579 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 RALGPS1Q5JS13 557 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 ZNF648Q5T619 568 aaPredicted RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 ERMARDQ5T6L9 678 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 VWA5B1Q5TIE3 1220 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 MARC1Q5VT66 337 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 IZUMO3Q5VZ72 239 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 CERS6Q6ZMG9 384 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 MED25Q71SY5 747 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 RHOT2Q8IXI1 618 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 ATPAF2Q8N5M1 289 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 RNF10Q8N5U6 811 aaKnown RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 ENDOVQ8N8Q3 282 aaKnown RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 TMEM102Q8N9M5 508 aaPredicted RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 KIF18AQ8NI77 898 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 ADAMTS17Q8TE56 1095 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 NSMCE1Q8WV22 266 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 UBXN4Q92575 508 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 CXorf40BQ96DE9 158 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 SLC41A2Q96JW4 573 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 ZNF514Q96K75 400 aaPredicted RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 FCRL4Q96PJ5 515 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 PEBP4Q96S96 227 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 SMAD5Q99717 465 aaKnown RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 NUP85Q9BW27 656 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 CARD9Q9H257 536 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 CHST8Q9H2A9 424 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 NT5MQ9NPB1 228 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 POT1Q9NUX5 634 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 ATXN10Q9UBB4 475 aa8.39□□□□□ -1.07
SDF2-204ENST00000587338 COPG1Q9Y678 874 aaKnown RBP8.39□□□□□ -1.07
SDF2-204ENST00000587338 SVILO95425 2214 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms