RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 MAGEB18Q96M61 343 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 PANX3Q96QZ0 392 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 C1QTNF7Q9BXJ2 289 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 CLPBQ9H078 707 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 FAM83DQ9H4H8 585 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 CAAP1Q9H8G2 361 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 IL26Q9NPH9 171 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 SEMA4GQ9NTN9 838 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 PCMTD2Q9NV79 361 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 CRLS1Q9UJA2 301 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 TMPRSS11EQ9UL52 423 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 SLC39A10Q9ULF5 831 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 CNOT6Q9ULM6 557 aaKnown RBP12.49□□□□□ -0.41
VMP1-202ENST00000585847 TMCO1Q9UM00 188 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 VWA7Q9Y334 891 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 HS3ST3A1Q9Y663 406 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 CACNA1EQ15878 2313 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 IGLV3-16A0A075B6K0 115 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 A0A1W2PPM1 405 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 CCDC78A2IDD5 438 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PRAMEF26H0Y7S4 382 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 SLC30A4O14863 429 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 KPNA5O15131 536 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 GPR39O43194 453 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 UGT1A9O60656 530 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ABCB7O75027 752 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PCCBP05166 539 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 C2P06681 752 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 DHRS4L1P0CG22 281 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PKMP14618 531 aaKnown RBP12.48□□□□□ -0.41
VMP1-202ENST00000585847 FDXRP22570 491 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 GABRB3P28472 473 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 LSP1P33241 339 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 TRIM23P36406 574 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 SERPINB5P36952 375 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ETV4P43268 484 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ATP1A2P50993 1020 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ATP6V0D1P61421 351 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 SGCGQ13326 291 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 CTBP1Q13363 440 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PEX6Q13608 980 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PDE1CQ14123 709 aaPredicted RBP12.48□□□□□ -0.41
VMP1-202ENST00000585847 LRRC14Q15048 493 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 CSRP2Q16527 193 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PDK4Q16654 411 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ZRANB3Q5FWF4 1079 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 WDR45BQ5MNZ6 344 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 LDLRAP1Q5SW96 308 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 HECTD2Q5U5R9 776 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PNCKQ6P2M8 343 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PRR23CQ6ZRP0 262 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 RAPH1Q70E73 1250 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 SYT12Q8IV01 421 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 RGL4Q8IZJ4 473 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 NKAPQ8N5F7 415 aaKnown RBP12.48□□□□□ -0.41
VMP1-202ENST00000585847 GPATCH11Q8N954 259 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ZNF398Q8TD17 642 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 TCP10LQ8TDR4 215 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 CKAP2Q8WWK9 683 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 PIGKQ92643 395 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 GRAMD1AQ96CP6 724 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ELMO2Q96JJ3 720 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 COPS8Q99627 209 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 AARSD1Q9BTE6 412 aaKnown RBP12.48□□□□□ -0.41
VMP1-202ENST00000585847 RIOK2Q9BVS4 552 aaKnown RBP12.48□□□□□ -0.41
VMP1-202ENST00000585847 MIR1-1HGQ9H1L0 117 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ARRDC1-AS1Q9H2J1 176 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ASB8Q9H765 288 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 UGT1A7Q9HAW7 530 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 UGT1A10Q9HAW8 530 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 UGT1A8Q9HAW9 530 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 ZDHHC3Q9NYG2 299 aa12.48□□□□□ -0.41
VMP1-202ENST00000585847 MTO1Q9Y2Z2 717 aaKnown RBP12.48□□□□□ -0.41
VMP1-202ENST00000585847 GPR89AB7ZAQ6 455 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 MAGEC1O60732 1142 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 KLHL2O95198 593 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 RBP1P09455 135 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 GPR89BP0CG08 455 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 PRSS56P0CW18 603 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 GRK2P25098 689 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 ACRV1P26436 265 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 AKT2P31751 481 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 GNGT1P63211 74 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 RACK1P63244 317 aaKnown RBP12.47□□□□□ -0.41
VMP1-202ENST00000585847 TMPRSS15P98073 1019 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 MPP1Q00013 466 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 INPP5AQ14642 412 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 CCDC6Q16204 474 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 TTLL9Q3SXZ7 439 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 ATG16L1Q676U5 607 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 MACC1Q6ZN28 852 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 SPATS2Q86XZ4 545 aaKnown RBP12.47□□□□□ -0.41
VMP1-202ENST00000585847 SLC22A18ASQ8N1D0 253 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 DDHD1Q8NEL9 900 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 OR13H1Q8NG92 308 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 AP2M1Q96CW1 435 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 CHMP6Q96FZ7 201 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 ZNF514Q96K75 400 aaPredicted RBP12.47□□□□□ -0.41
VMP1-202ENST00000585847 MRPL57Q9BQC6 102 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms