RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 NME6O75414 186 aaPredicted RBP10.15□□□□□ -0.78
RFFL-212ENST00000584655 RBP1P09455 135 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 CCNG1P51959 295 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 SLC7A2P52569 658 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 CTSCP53634 463 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 KRT33BQ14525 404 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 UNC50Q53HI1 259 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 RABL3Q5HYI8 236 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 TECRLQ5HYJ1 363 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 FAM45BPQ6NSW5 357 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 NCEH1Q6PIU2 408 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 USP45Q70EL2 814 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 BHLHE22Q8NFJ8 381 aaPredicted RBP10.15□□□□□ -0.78
RFFL-212ENST00000584655 STAG3L4Q8TBR4 150 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 FAM45AQ8TCE6 357 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 C7orf26Q96N11 449 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 C1QTNF1Q9BXJ1 281 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 CD93Q9NPY3 652 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 RNF11Q9Y3C5 154 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 CROCCQ5TZA2 2017 aa10.15□□□□□ -0.78
RFFL-212ENST00000584655 CACNA1HO95180 2353 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 PIKFYVEQ9Y2I7 2098 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 PRAMEF33A0A0G2JMD5 474 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 SAC3D1A6NKF1 404 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 ZNF839A8K0R7 811 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 WDR47O94967 919 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 FAM163BP0C2L3 166 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 CD1DP15813 335 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 MSH3P20585 1137 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 CCNFP41002 786 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 NFATC2Q13469 925 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 EIF4EBP2Q13542 120 aaPredicted RBP10.15□□□□□ -0.79
RFFL-212ENST00000584655 PTK2BQ14289 1009 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 TAF1AQ15573 450 aaPredicted RBP10.15□□□□□ -0.79
RFFL-212ENST00000584655 CTSL3PQ5NE16 218 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 KIAA1324Q6UXG2 1013 aaKnown RBP10.15□□□□□ -0.79
RFFL-212ENST00000584655 SUSD6Q92537 303 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 NCLNQ969V3 563 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 OTUB1Q96FW1 271 aaPredicted RBP10.15□□□□□ -0.79
RFFL-212ENST00000584655 WDR41Q9HAD4 459 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 PDFQ9HBH1 243 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 ZBTB26Q9HCK0 441 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 SNX13Q9Y5W8 968 aa10.15□□□□□ -0.79
RFFL-212ENST00000584655 ANGPT2O15123 496 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 PFDN6O15212 129 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 IGLV3-27P01718 113 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 DGKEP52429 567 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 TFF2Q03403 129 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 NAE1Q13564 534 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 RBBP5Q15291 538 aaKnown RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 GPRC6AQ5T6X5 926 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 SETD3Q86TU7 594 aaPredicted RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 CMTR2Q8IYT2 770 aaKnown RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 DSELQ8IZU8 1212 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 ZNF689Q96CS4 500 aaPredicted RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 C19orf60Q96EN9 201 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 PANX3Q96QZ0 392 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 CDK5RAP1Q96SZ6 601 aaKnown RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 TTLL2Q9BWV7 592 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 ARHGEF3Q9NR81 526 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 DNAJC15Q9Y5T4 150 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 AZIN1O14977 448 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 ADH5P11766 374 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 GPR1P46091 355 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 HK3P52790 923 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 UFM1P61960 85 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 TGFBIQ15582 683 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 TMEM220Q6QAJ8 160 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 IZUMO2Q6UXV1 221 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 UBE2R2Q712K3 238 aaPredicted RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 OR14C36Q8NHC7 312 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 ACMSDQ8TDX5 336 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 LPGAT1Q92604 370 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 DLG3Q92796 817 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 TEX37Q96LM6 180 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 THUMPD3Q9BV44 507 aaKnown RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 MTIF3Q9H2K0 278 aaKnown RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 FAM83DQ9H4H8 585 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 XKR8Q9H6D3 395 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 IL17CQ9P0M4 197 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 STOX2Q9P2F5 926 aaPredicted RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 ARHGAP26Q9UNA1 814 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 A0A0J9YYE9 177 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 A0A1W2PP55 124 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 PDZK1P1A8MUH7 402 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 MRASO14807 208 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 TSPAN6O43657 245 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 CPSF4O95639 269 aaKnown RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 TRBC1P01850 177 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 SERPINA6P08185 405 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 HIST1H2AGP0C0S8 130 aaPredicted RBP10.14□□□□□ -0.79
RFFL-212ENST00000584655 HIST1H2ADP20671 130 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 GRIA3P42263 894 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 TTPAP49638 278 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 CLCN4P51793 760 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 MTPNP58546 118 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 ZNF284Q2VY69 593 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 GDPD4Q6W3E5 623 aa10.14□□□□□ -0.79
RFFL-212ENST00000584655 ZNF761Q86XN6 746 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms