RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SPATA22Q8NHS9 363 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 GLYATL1Q969I3 302 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 VAT1Q99536 393 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 EPB41L1Q9H4G0 881 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 TRABDQ9H4I3 376 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 TRIM39Q9HCM9 518 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 SARS2Q9NP81 518 aaKnown RBP10.97□□□□□ -0.65
CCDC47-206ENST00000584112 LUZP4Q9P127 313 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 MAP10Q9P2G4 905 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 KLHL8Q9P2G9 620 aaPredicted RBP10.97□□□□□ -0.65
CCDC47-206ENST00000584112 ATXN10Q9UBB4 475 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 TBC1D29Q9UFV1 150 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 FAM153AQ9UHL3 310 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 SHOC2Q9UQ13 582 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 KCNK6Q9Y257 313 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 PRKAB1Q9Y478 270 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 PCDHA13Q9Y5I0 950 aa10.97□□□□□ -0.65
CCDC47-206ENST00000584112 hCG_1818297A0A087WSY0 165 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 HACD1B0YJ81 288 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 PRICKLE3O43900 615 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 VEGFDO43915 354 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 SNX2O60749 519 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 IPO7O95373 1038 aaKnown RBP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 EPOP01588 193 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 PIRTP0C851 137 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 THRAP10827 490 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 F3P13726 295 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 PECAM1P16284 738 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 LEPRP48357 1165 aaKnown RBP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 ATP1A2P50993 1020 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 CLCNKAP51800 687 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 EPHA4P54764 986 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 NR6A1Q15406 480 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 PPP2R5EQ16537 467 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 NKAIN2Q5VXU1 208 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 ZDHHC20Q5W0Z9 365 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 IYDQ6PHW0 289 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 WDR74Q6RFH5 385 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 B4GALNT4Q76KP1 1039 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 DAAM2Q86T65 1068 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 IL22RA1Q8N6P7 574 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 GPR26Q8NDV2 337 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 EID2BQ96D98 161 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 PLEKHG4BQ96PX9 1271 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 TAAR9Q96RI9 348 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 FERMT1Q9BQL6 677 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 OR2AG1Q9H205 316 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 HACD3Q9P035 362 aa10.96□□□□□ -0.65
CCDC47-206ENST00000584112 SAE1Q9UBE0 346 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 PCYT1BQ9Y5K3 369 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-206ENST00000584112 TRBV23OR9-2A0A075B6M9 112 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 HEATR9A2RTY3 570 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 A6NCN8 305 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.95□□□□□ -0.66
CCDC47-206ENST00000584112 STMND1H3BQB6 276 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 CHUKO15111 745 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 KMOO15229 486 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 SORBS2O94875 1100 aaKnown RBP10.95□□□□□ -0.66
CCDC47-206ENST00000584112 EML2O95834 649 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF8P17098 575 aaPredicted RBP10.95□□□□□ -0.66
CCDC47-206ENST00000584112 BPIP17213 487 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 NFKB1P19838 968 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 CSF2RBP32927 897 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 HMGCLP35914 325 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 ARSDP51689 593 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 WNT3AP56704 352 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 RAB15P59190 212 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 COPS2P61201 443 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 WASHC5Q12768 1159 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 NFATC2Q13469 925 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 LLGL1Q15334 1064 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 INSCQ1MX18 579 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 KDELC1Q6UW63 502 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 PID1Q7Z2X4 250 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 ADGRG6Q86SQ4 1221 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 LRRTM4Q86VH4 590 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 PMEPA1Q969W9 287 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 QKIQ96PU8 341 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC47-206ENST00000584112 VPS35Q96QK1 796 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 PANX2Q96RD6 677 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 FCRL5Q96RD9 977 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 ASPSCR1Q9BZE9 553 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 GOLPH3Q9H4A6 298 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 OSGEPL1Q9H4B0 414 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 KLC4Q9NSK0 619 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 UBP1Q9NZI7 540 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 PDP2Q9P2J9 529 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 TRHDEQ9UKU6 1024 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 PCDHGA3Q9Y5H0 932 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 ADGRG1Q9Y653 693 aa10.95□□□□□ -0.66
CCDC47-206ENST00000584112 LOC285095A0A1B0GVY8 99 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 LILRA5A6NI73 299 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 B4E171 279 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 MKRN2OSH3BPM6 223 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 APOC4-APOC2K7ER74 178 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 APOC2P02655 101 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 FGF3P11487 239 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms