RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 NSUN5Q96P11 429 aaKnown RBP22.36■■□□□ 1.17
CCDC47-204ENST00000582252 CCT7Q99832 543 aa22.36■■□□□ 1.17
CCDC47-204ENST00000582252 HGH1Q9BTY7 390 aa22.36■■□□□ 1.17
CCDC47-204ENST00000582252 BOCQ9BWV1 1114 aa22.36■■□□□ 1.17
CCDC47-204ENST00000582252 MRPL1Q9BYD6 325 aaKnown RBP22.36■■□□□ 1.17
CCDC47-204ENST00000582252 FAM126AQ9BYI3 521 aaPredicted RBP22.36■■□□□ 1.17
CCDC47-204ENST00000582252 SEMA4BQ9NPR2 832 aaPredicted RBP22.36■■□□□ 1.17
CCDC47-204ENST00000582252 SPATS2LQ9NUQ6 558 aaKnown RBP22.36■■□□□ 1.17
CCDC47-204ENST00000582252 OBP2AQ9NY56 170 aa22.36■■□□□ 1.17
CCDC47-204ENST00000582252 A8MX80 341 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 TRIM16O95361 564 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 ADH1CP00326 375 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 SRPRAP08240 638 aaKnown RBP22.35■■□□□ 1.17
CCDC47-204ENST00000582252 MTTPP55157 894 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 PKNOX1P55347 436 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 RBBP7Q16576 425 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 BNC2Q6ZN30 1099 aaPredicted RBP22.35■■□□□ 1.17
CCDC47-204ENST00000582252 MYLK4Q86YV6 388 aaPredicted RBP22.35■■□□□ 1.17
CCDC47-204ENST00000582252 DDIASQ8IXT1 998 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 VOPP1Q96AW1 172 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 LRCH3Q96II8 777 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 COPS8Q99627 209 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 LATS2Q9NRM7 1088 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 RAD18Q9NS91 495 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 DUS2Q9NX74 493 aaKnown RBP22.35■■□□□ 1.17
CCDC47-204ENST00000582252 UTP6Q9NYH9 597 aaKnown RBP22.35■■□□□ 1.17
CCDC47-204ENST00000582252 BCAP29Q9UHQ4 241 aa22.35■■□□□ 1.17
CCDC47-204ENST00000582252 SPTBN5Q9NRC6 3674 aaKnown RBP22.35■■□□□ 1.17
CCDC47-204ENST00000582252 ESRRBO95718 433 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 CBSLP0DN79 551 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 UROSP10746 265 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 CBSP35520 551 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 PTSQ03393 145 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 DHCR24Q15392 516 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 HOMEZQ8IX15 550 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 CHST14Q8NCH0 376 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 BPIFB1Q8TDL5 484 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 LRIG1Q96JA1 1093 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 NECTIN4Q96NY8 510 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 KCTD5Q9NXV2 234 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 B4GALT6Q9UBX8 382 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 FBXO10Q9UK96 956 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 PIP5K1BO14986 540 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 ADH5P11766 374 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 VIPR1P32241 457 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 VIPR2P41587 438 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 PTDSS1P48651 473 aaKnown RBP22.34■■□□□ 1.17
CCDC47-204ENST00000582252 SPINT3P49223 89 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 DGKGP49619 791 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 ACADVLP49748 655 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 HK3P52790 923 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 PTK2BQ14289 1009 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 PCBP2Q15366 365 aaKnown RBP eCLIP22.34■■□□□ 1.17
CCDC47-204ENST00000582252 CHCHD4Q8N4Q1 142 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 NAT16Q8N8M0 369 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 PDPRQ8NCN5 879 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 SMRP1Q8NCR6 262 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 ZNF382Q96SR6 550 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 TACO1Q9BSH4 297 aaKnown RBP22.34■■□□□ 1.17
CCDC47-204ENST00000582252 SLC25A23Q9BV35 468 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 MRPL40Q9NQ50 206 aaKnown RBP22.34■■□□□ 1.17
CCDC47-204ENST00000582252 OARD1Q9Y530 152 aa22.34■■□□□ 1.17
CCDC47-204ENST00000582252 EIF3FO00303 357 aaPredicted RBP22.33■■□□□ 1.17
CCDC47-204ENST00000582252 OR56A5P0C7T3 313 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 LBPP18428 481 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 ITGB6P18564 788 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 LHCGRP22888 699 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 VHLP40337 213 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 PPP1R3AQ16821 1122 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 MMEL1Q495T6 779 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 AGKQ53H12 422 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 GPRIN3Q6ZVF9 776 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 HCAR2Q8TDS4 363 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 OSCP1Q8WVF1 389 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 RSPRY1Q96DX4 576 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 AKTIPQ9H8T0 292 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 PRSS21Q9Y6M0 314 aa22.33■■□□□ 1.17
CCDC47-204ENST00000582252 PLXNB3Q9ULL4 1909 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 TSPAN11A1L157 253 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 HOXC11O43248 304 aaPredicted RBP22.32■■□□□ 1.16
CCDC47-204ENST00000582252 PDE5AO76074 875 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 SNRPB2P08579 225 aaKnown RBP22.32■■□□□ 1.16
CCDC47-204ENST00000582252 C1SP09871 688 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 AGTR2P50052 363 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 ST8SIA6P61647 398 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 GPRC6AQ5T6X5 926 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 SBSNQ6UWP8 590 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 PPFIBP2Q8ND30 876 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 KCNV2Q8TDN2 545 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 FRS2Q8WU20 508 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 MRGPRX3Q96LB0 322 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 LRRC3BQ96PB8 259 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 WDR41Q9HAD4 459 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 ZFP14Q9HCL3 533 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 POMPQ9Y244 141 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 XIRP2A4UGR9 3374 aa22.32■■□□□ 1.16
CCDC47-204ENST00000582252 HEPACAM2A8MVW5 462 aa22.31■■□□□ 1.16
CCDC47-204ENST00000582252 E2F3O00716 465 aa22.31■■□□□ 1.16
CCDC47-204ENST00000582252 FFAR2O15552 330 aa22.31■■□□□ 1.16
CCDC47-204ENST00000582252 CYP17A1P05093 508 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms