RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 HMGCLP35914 325 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 ACY1Q03154 408 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 DMPKQ09013 629 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 PWWP2BQ6NUJ5 590 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 KMT5CQ86Y97 462 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 SPATA22Q8NHS9 363 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 GDAP1Q8TB36 358 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 THAP4Q8WY91 577 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 TTC25Q96NG3 672 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 MAK16Q9BXY0 300 aaKnown RBP18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 GLOD4Q9HC38 313 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 LRRC4CQ9HCJ2 640 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 BPIFA1Q9NP55 256 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 VPS4BO75351 444 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 DNAJB5O75953 348 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 MT-CYBP00156 380 aaPredicted RBP18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 GYPCP04921 128 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 PPP1CAP62136 330 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 UGT8Q16880 541 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 TEX44Q53QW1 395 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 ZDHHC20Q5W0Z9 365 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 AMZ2Q86W34 360 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 GPR150Q8NGU9 434 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 ZNF514Q96K75 400 aaPredicted RBP18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 CD180Q99467 661 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 PACSIN1Q9BY11 444 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 TRIM55Q9BYV6 548 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 ZCCHC2Q9C0B9 1178 aaKnown RBP18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 TRABDQ9H4I3 376 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 VPS4AQ9UN37 437 aa18.8■□□□□ 0.6
CDKN2A-213ENST00000579122 A0A0A6YYK5 440 aaPredicted RBP18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 PTPN4P29074 926 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 CDC25BP30305 580 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 MESDQ14696 234 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 KCNAB1Q14722 419 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 RPE65Q16518 533 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 SLC18A3Q16572 532 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 C4orf17Q53FE4 359 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 NPNTQ6UXI9 565 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 SYVN1Q86TM6 617 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 VSTM4Q8IW00 320 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 EFCAB3Q8N7B9 438 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 GALNT11Q8NCW6 608 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 AKIRIN1Q9H9L7 192 aaPredicted RBP18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 IL26Q9NPH9 171 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 FGF21Q9NSA1 209 aa18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 DNMT3AQ9Y6K1 912 aaPredicted RBP18.79■□□□□ 0.6
CDKN2A-213ENST00000579122 TLCD2A6NGC4 264 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 TTLL8A6PVC2 850 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 PMPCBO75439 489 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 POP7O75817 140 aaKnown RBP18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 TMEM253P0C7T8 217 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 EBLN1P0CF75 366 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 HNRNPH3P31942 346 aaKnown RBP18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 ARL4DP49703 201 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 PGDP52209 483 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 RPS15P62841 145 aaKnown RBP18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 HSD11B2P80365 405 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 DNTTIP2Q5QJE6 756 aaKnown RBP18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 LDLRAP1Q5SW96 308 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 CAPRIN2Q6IMN6 1127 aaKnown RBP18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 FAM199XQ6PEV8 388 aaPredicted RBP18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 D2HGDHQ8N465 521 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 TTC30BQ8N4P2 665 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 CPT1CQ8TCG5 803 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 TEKT5Q96M29 485 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 RUFY1Q96T51 708 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 MAP3K3Q99759 626 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 UBP1Q9NZI7 540 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 PCDHGA9Q9Y5G4 932 aaKnown RBP18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 UNC79Q9P2D8 2635 aa18.78■□□□□ 0.6
CDKN2A-213ENST00000579122 LOC285095A0A1B0GVY8 99 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 CPNE3O75131 537 aaKnown RBP18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 PTPN3P26045 913 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 SPAM1P38567 509 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 UQCRFS1P47985 274 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 RPS18P62269 152 aaKnown RBP18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 PDE1BQ01064 536 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 LAMB3Q13751 1172 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 PLCL1Q15111 1095 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 FAM83HQ6ZRV2 1179 aaPredicted RBP18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 RFX6Q8HWS3 928 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 RASGEF1AQ8N9B8 481 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 DDHD1Q8NEL9 900 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 MLXIPLQ9NP71 852 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 FAM153AQ9UHL3 310 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 PSMD13Q9UNM6 376 aa18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 FARSAQ9Y285 508 aaKnown RBP18.77■□□□□ 0.6
CDKN2A-213ENST00000579122 UBA6A0AVT1 1052 aaPredicted RBP18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 OR5K3A6NET4 321 aa18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 EPOP01588 193 aa18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 GNLYP22749 145 aa18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 ARHGAP25P42331 645 aa18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 CTSCP53634 463 aa18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 TUBB4BP68371 445 aa18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 TUBB2AQ13885 445 aa18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 PRKD1Q15139 912 aaPredicted RBP18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 FHL5Q5TD97 284 aa18.76■□□□□ 0.59
CDKN2A-213ENST00000579122 LRRC38Q5VT99 294 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms