RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 USP45Q70EL2 814 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 LPCAT2Q7L5N7 544 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 KDELC2Q7Z4H8 507 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 IQCHQ86VS3 1027 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 HOOK3Q86VS8 718 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ATCAYQ86WG3 371 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SYT12Q8IV01 421 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 KLHL7Q8IXQ5 586 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3Q8IZP1 549 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SLC25A41Q8N5S1 370 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 PNPLA1Q8N8W4 532 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 MFSD2AQ8NA29 543 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 OR13C4Q8NGS5 318 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 OR2I1PQ8NGU4 316 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 PDCD6IPQ8WUM4 868 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ATOH1Q92858 354 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TRIM44Q96DX7 344 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 PDXPQ96GD0 296 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 POM121Q96HA1 1249 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SGSM3Q96HU1 749 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FCRL3Q96P31 734 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SERPINB12Q96P63 405 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 PPP1R2P1Q96PQ5 205 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 PLEKHG4BQ96PX9 1271 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 VPS35Q96QK1 796 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 KRT12Q99456 494 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 NAP1L3Q99457 506 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ERP44Q9BS26 406 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 MCMBPQ9BTE3 642 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 LRRC1Q9BTT6 524 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 KIFC1Q9BW19 673 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 LGR4Q9BXB1 951 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FRMD8Q9BZ67 464 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ARRDC1-AS1Q9H2J1 176 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TCEAL2Q9H3H9 227 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TRABDQ9H4I3 376 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 MRM3Q9HC36 420 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FGF22Q9HCT0 170 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 IL26Q9NPH9 171 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SMOXQ9NWM0 555 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SYBUQ9NX95 663 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 GULP1Q9UBP9 304 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SLC2A6Q9UGQ3 507 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FEZ2Q9UHY8 353 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 RIMKLBQ9ULI2 386 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TPX2Q9ULW0 747 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SHOC2Q9UQ13 582 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 NCKAP1Q9Y2A7 1128 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TCAF1Q9Y4C2 921 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TTLL3Q9Y4R7 772 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 HS3ST3A1Q9Y663 406 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ARL5AQ9Y689 179 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TEX264Q9Y6I9 313 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 CCDC88CQ9P219 2028 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 LY6G6EA0A0G2JKS1 128 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 GOLGA6L10A0A0M3HER8 536 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 C1orf232A0A0U1RR37 186 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 SPTY2D1-AS1A0A0U1RR47 76 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 A0A1B0GTW7 788 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 A0A1B0GVT2 93 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 RGSL1A5PLK6 1076 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 A6NCN8 305 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 TMEM202A6NGA9 273 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 FAM47DPA6NHR8 397 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 A6NNZ2 444 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 MEI4A8MW99 385 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 PRAMEF26H0Y7S4 382 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 CCL22O00626 93 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 CHUKO15111 745 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 BCAT2O15382 392 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 SLC31A1O15431 190 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 PSMD3O43242 534 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 DNAJC6O75061 913 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 NDUFS2O75306 463 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 PPFIA2O75334 1257 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 TNFRSF21O75509 655 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 STK10O94804 968 aaKnown RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 RHOBTB1O94844 696 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 PCDH8O95206 1070 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 GAS8O95995 478 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 LMNAP02545 664 aaKnown RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 PDGFAP04085 211 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 ELFN1P0C7U0 828 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 MYBL2P10244 700 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 SPTBP11277 2137 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 CYP2A6P11509 494 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 NME1P15531 152 aaKnown RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 CA4P22748 312 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 MGAT1P26572 445 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 NMBRP28336 390 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 CD38P28907 300 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 TRHRP34981 398 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 PLA2G5P39877 138 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 RXRGP48443 463 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 DHPSP49366 369 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 CSNK1EP49674 416 aaKnown RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 CDKN1CP49918 316 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 ITGA8P53708 1063 aa3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 DRG2P55039 364 aaKnown RBP3.75□□□□□ -1.81
SMARCE1-215ENST00000578995 FAM193AP78312 1265 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms