RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 SEPHS1P49903 392 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 CTSCP53634 463 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 KCNC4Q03721 635 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 FOXM1Q08050 763 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 KCNAB2Q13303 367 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 LDLRAP1Q5SW96 308 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 GPRC6AQ5T6X5 926 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 AMZ2Q86W34 360 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 GPR150Q8NGU9 434 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 STARD8Q92502 1023 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 GORASP1Q9BQQ3 440 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 FSD1LQ9BXM9 530 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ULBP3Q9BZM4 244 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 UGT1A7Q9HAW7 530 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 UGT1A10Q9HAW8 530 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 UGT1A8Q9HAW9 530 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 EPHA6Q9UF33 1036 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 RSPH14Q9UHP6 348 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 TUBD1Q9UJT1 453 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 TRHDEQ9UKU6 1024 aa16.32■□□□□ 0.2
CDK5RAP3-206ENST00000578018 APOC4-APOC2K7ER74 178 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 POP7O75817 140 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 RASSF9O75901 435 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 APOC2P02655 101 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 HALP42357 657 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 CSRP3P50461 194 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 XRCC4Q13426 336 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ITGA9Q13797 1035 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 FAM83HQ6ZRV2 1179 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 KLHL6Q8WZ60 621 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 RNF31Q96EP0 1072 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ZDHHC12Q96GR4 267 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 OR6C1Q96RD1 312 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 HEMGNQ9BXL5 484 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 RAB33BQ9H082 229 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 GBA3Q9H227 469 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 PKP3Q9Y446 797 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 PCDHA13Q9Y5I0 950 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 RPS6KL1Q9Y6S9 549 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 LRRK2Q5S007 2527 aa16.31■□□□□ 0.2
CDK5RAP3-206ENST00000578018 OR2AG2A6NM03 316 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 RBL1P28749 1068 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 PPP1CAP62136 330 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 MC1RQ01726 317 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 NFE2L1Q14494 772 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 IL11RAQ14626 422 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 PTPRCAPQ14761 206 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 CRTC2Q53ET0 693 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ATP1A1-AS1Q5TC04 95 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 CACHD1Q5VU97 1274 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 IRGCQ6NXR0 463 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 FAM92BQ6ZTR7 304 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 FICDQ9BVA6 458 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 MRPS18BQ9Y676 258 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ARL5AQ9Y689 179 aa16.3■□□□□ 0.2
CDK5RAP3-206ENST00000578018 GOLGA6L3A6NEY3 463 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 H7C0C1 242 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 STX7O15400 261 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ANXA9O76027 345 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 PRAMEF1O95521 474 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 AGTP01019 485 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 FGF5P12034 268 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 NELFEP18615 380 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 FECHP22830 423 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 F8A1P23610 371 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 AKT1P31749 480 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 CTNNA1P35221 906 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ATP5OP48047 213 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 GEMP55040 296 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 RPE65Q16518 533 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ITPRIPL1Q6GPH6 555 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 TMEM220Q6QAJ8 160 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 C6orf15Q6UXA7 325 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 DAAM2Q86T65 1068 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 CCDC170Q8IYT3 715 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 GALNT6Q8NCL4 622 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ACTL9Q8TC94 416 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ELMO2Q96JJ3 720 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 SEMA5BQ9P283 1151 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 CROTQ9UKG9 612 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 PSMD13Q9UNM6 376 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 DNMT3AQ9Y6K1 912 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 NAV2Q8IVL1 2488 aa16.29■□□□□ 0.2
CDK5RAP3-206ENST00000578018 PJA2O43164 708 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 NDUFA10O95299 355 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 MTHFD1P11586 935 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 TCN2P20062 427 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 PBLDP30039 288 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 CDC25BP30305 580 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 ADRA1AP35348 466 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 DLSTP36957 453 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 COPS2P61201 443 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 OTUD4Q01804 1114 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 OLIG2Q13516 323 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 SPA17Q15506 151 aa16.28■□□□□ 0.2
CDK5RAP3-206ENST00000578018 TAF1AQ15573 450 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms