RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ASXL3Q9C0F0 2248 aa12.56□□□□□ -0.4
TRAPPC1-206ENST00000573989 SPTBN2O15020 2390 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 LY6G6EA0A0G2JKS1 128 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 C17orf113A0A1B0GUU1 675 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 RHPN2P1A8MT19 583 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 PRSS56P0CW18 603 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 OGNP20774 298 aaKnown RBP12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 PBLDP30039 288 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 DRG2P55039 364 aaKnown RBP12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 B4GALNT1Q00973 533 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 HLTFQ14527 1009 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 SPANXN3Q5MJ09 141 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 GUSBP11Q6P575 273 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 WASH2PQ6VEQ5 465 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 CENPUQ71F23 418 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 SLCO6A1Q86UG4 719 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 LRRC6Q86X45 466 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 NAGSQ8N159 534 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 GALNT15Q8N3T1 639 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 PNPLA1Q8N8W4 532 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 GPR150Q8NGU9 434 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 HM13Q8TCT9 377 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 SH3KBP1Q96B97 665 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 CCM2Q9BSQ5 444 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 WASH6PQ9NQA3 447 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 C20orf96Q9NUD7 363 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 TOR4AQ9NXH8 423 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 TBC1D29Q9UFV1 150 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 SLC23A2Q9UGH3 650 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 FAM169AQ9Y6X4 670 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 U3KQA8 63 aa12.55□□□□□ -0.4
TRAPPC1-206ENST00000573989 PRMT5O14744 637 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 DKK1O94907 266 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 ADRB1P08588 477 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 FOXK2Q01167 660 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 PLOD1Q02809 727 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 PDIA2Q13087 525 aaKnown RBP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 SEPT7Q16181 437 aaKnown RBP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 AGAP9Q5VTM2 703 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 NEPROQ6NW34 567 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 IYDQ6PHW0 289 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 ABRAXAS1Q6UWZ7 409 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 C17orf82Q86X59 251 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 TRIM48Q8IWZ4 208 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 SFRP1Q8N474 314 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 ARL14Q8N4G2 192 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 CCDC74AQ96AQ1 378 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 PANX3Q96QZ0 392 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 CCDC3Q9BQI4 270 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 FAM167BQ9BTA0 163 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 LRRC1Q9BTT6 524 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 FAM129AQ9BZQ8 928 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 FOXP3Q9BZS1 431 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 SARS2Q9NP81 518 aaKnown RBP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 PRDM8Q9NQV8 689 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 ZC3H7BQ9UGR2 993 aaKnown RBP12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 GNPTGQ9UJJ9 305 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 BPTFQ12830 3046 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 UNC13CQ8NB66 2214 aa12.54□□□□□ -0.4
TRAPPC1-206ENST00000573989 PTPRBP23467 1997 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 ZCWPW2A0A1B0GU75 182 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 UBA6A0AVT1 1052 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 H3BMM5 538 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 LIN7AO14910 233 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 VIPP01282 170 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 MYF5P13349 255 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 XRCC1P18887 633 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 RPS3P23396 243 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 ARNTP27540 789 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 RPL10P27635 214 aaKnown RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 ELK3P41970 407 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 GPR3P46089 330 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 FASLGP48023 281 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 ARCN1P48444 511 aaKnown RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 PLTPP55058 493 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 MAZP56270 477 aaKnown RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 HHEXQ03014 270 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 FOXC1Q12948 553 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 RPA4Q13156 261 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 NFE2L1Q14494 772 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 CRYMQ14894 314 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 METRNLQ641Q3 311 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 PTRHD1Q6GMV3 140 aaKnown RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 DHRS13Q6UX07 377 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 CEP128Q6ZU80 1094 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 KCNMB4Q86W47 210 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 TMPRSS12Q86WS5 348 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 RBM12BQ8IXT5 1001 aaKnown RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 CFAP206Q8IYR0 622 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 CLDN19Q8N6F1 224 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 SLC37A2Q8TED4 501 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 CXorf40BQ96DE9 158 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 FCRL3Q96P31 734 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 SLC38A3Q99624 504 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 PHACTR1Q9C0D0 580 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms