RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 TBKBP1A7MCY6 615 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 H7C4K7 107 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ESR1P03372 595 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 HRH2P25021 359 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 PIK3CGP48736 1102 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 MTA1Q13330 715 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 SELPLGQ14242 412 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 GPNMBQ14956 572 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 TMEM259Q4ZIN3 620 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 PDCD4Q53EL6 469 aaKnown RBP11.08□□□□□ -0.64
RPAIN-212ENST00000573126 TMTC4Q5T4D3 741 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 PTRH1Q86Y79 214 aaKnown RBP11.08□□□□□ -0.64
RPAIN-212ENST00000573126 CLDN19Q8N6F1 224 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 OR4F6Q8NGB9 312 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 RNF145Q96MT1 663 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 BOCQ9BWV1 1114 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 GPR63Q9BZJ6 419 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 THEGQ9P2T0 379 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 PKP3Q9Y446 797 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 CHD5Q8TDI0 1954 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 ZFC3H1O60293 1989 aaKnown RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 FAM234BA2RU67 622 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 K7ERQ8 282 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 CLOCKO15516 846 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 RASAL1O95294 804 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 SNAP29O95721 258 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 MYF6P23409 242 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 CA5AP35218 305 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 PTGER3P43115 390 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 CLCN4P51793 760 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 SMARCB1Q12824 385 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 GRIK2Q13002 908 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 SLC36A3Q495N2 470 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 RFTN2Q52LD8 501 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 OTUD3Q5T2D3 398 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 SBSNQ6UWP8 590 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 GOLGA7Q7Z5G4 137 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 ZFAND4Q86XD8 727 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 CARNMT1Q8N4J0 409 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 HM13Q8TCT9 377 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 CDK5RAP1Q96SZ6 601 aaKnown RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 LRRC3Q9BY71 257 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 CIPCQ9C0C6 399 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 ACTL8Q9H568 366 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 ZIM2Q9NZV7 527 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 HSFX1Q9UBD0 423 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 ABT1Q9ULW3 272 aaKnown RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 POLR3HQ9Y535 204 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 SLC30A1Q9Y6M5 507 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 TET1Q8NFU7 2136 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 H0Y626 953 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 PRMT5O14744 637 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 RSL1D1O76021 490 aaKnown RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 SEC24AO95486 1093 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 CDK4P11802 303 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 PCNAP12004 261 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 HMGA1P17096 107 aaKnown RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 PSMA3P25788 255 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 GDF5P43026 501 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 HSPA7P48741 367 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 RHOAP61586 193 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 TUBA4AP68366 448 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 ELAVL2Q12926 359 aaKnown RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 ABRAXAS2Q15018 415 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 PLCL1Q15111 1095 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 TCTN1Q2MV58 587 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 AARS2Q5JTZ9 985 aaKnown RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 TMEM214Q6NUQ4 689 aaKnown RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 FAM126BQ8IXS8 530 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 PAF1Q8N7H5 531 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 GOLM1Q8NBJ4 401 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 SEPT8Q92599 483 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 BIRC7Q96CA5 298 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 CHID1Q9BWS9 393 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 APOL5Q9BWW9 433 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 PFDN4Q9NQP4 134 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 COMMD8Q9NX08 183 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 IL17CQ9P0M4 197 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 EVLQ9UI08 416 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-212ENST00000573126 FADS3Q9Y5Q0 445 aa11.07□□□□□ -0.64
RPAIN-212ENST00000573126 ANKRD36A6QL64 1941 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 A8MX80 341 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 OR7A17O14581 309 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 FFAR3O14843 346 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 LSM1O15116 133 aaKnown RBP11.06□□□□□ -0.64
RPAIN-212ENST00000573126 GPR42O15529 346 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 PRAMEF1O95521 474 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 LDLRP01130 860 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 ENO2P09104 434 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-212ENST00000573126 FCGR1AP12314 374 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 SELPP16109 830 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 RPS9P46781 194 aaKnown RBP11.06□□□□□ -0.64
RPAIN-212ENST00000573126 YAP1P46937 504 aaKnown RBP11.06□□□□□ -0.64
RPAIN-212ENST00000573126 TM4SF4P48230 202 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 CDK9P50750 372 aaKnown RBP11.06□□□□□ -0.64
RPAIN-212ENST00000573126 EEFSECP57772 596 aaKnown RBP11.06□□□□□ -0.64
RPAIN-212ENST00000573126 PLD1Q13393 1074 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 GTF2H2Q13888 395 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 PTGR1Q14914 329 aa11.06□□□□□ -0.64
RPAIN-212ENST00000573126 AP5B1Q2VPB7 878 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms