RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PPTC7Q8NI37 304 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 METTL6Q8TCB7 284 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 EPSTI1Q96J88 318 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 CAPS2Q9BXY5 557 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 LHPPQ9H008 270 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 TMPRSS5Q9H3S3 457 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 SNTG1Q9NSN8 517 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 IRAK4Q9NWZ3 460 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 TAB2Q9NYJ8 693 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 GUCA1BQ9UMX6 200 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 DTX4Q9Y2E6 619 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC00561-201ENST00000565815 SCN5AQ14524 2016 aa4.27□□□□□ -1.73
LINC00561-201ENST00000565815 NLRC5Q86WI3 1866 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 MICAL3Q7RTP6 2002 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM8BA6NDV4 472 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 BTNL10A8MVZ5 291 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TMCO5BA8MYB1 307 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 HMGB1P1B2RPK0 211 aaPredicted RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 LRP3O75074 770 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 KIAA0754O94854 1291 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ERLIN2O94905 339 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TGFB3P10600 412 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 CHRNB1P11230 501 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 HOXB9P17482 250 aaPredicted RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TRIM21P19474 475 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 AOC1P19801 751 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 BDNFP23560 247 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 PSMC2P35998 433 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 GJC1P36383 396 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 CCT6AP40227 531 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 PRCPP42785 496 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 POLD2P49005 469 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 CDH15P55291 814 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 STX17P56962 302 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 LRRC63Q05C16 580 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 GIT2Q14161 759 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 DUSP6Q16828 381 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF766Q5HY98 468 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 CES5AQ6NT32 575 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TTI2Q6NXR4 508 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM88Q6PEY1 159 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 SERINC5Q86VE9 423 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 BLIDQ8IZY5 108 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 GHDCQ8N2G8 530 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 NOA1Q8NC60 698 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 DNAAF1Q8NEP3 725 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF398Q8TD17 642 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 SLC9A6Q92581 669 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 CCDC42Q96M95 316 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 NPAS1Q99742 590 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TUBGCP2Q9BSJ2 902 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 RANBP17Q9H2T7 1088 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 NHEJ1Q9H9Q4 299 aaPredicted RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 PLEKHA5Q9HAU0 1116 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 OLA1Q9NTK5 396 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TCP11L1Q9NUJ3 509 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF69Q9UC07 566 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 SARDHQ9UL12 918 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 CCPG1Q9ULG6 757 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 SLC8A2Q9UPR5 921 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 MYH6P13533 1939 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 A0A0G2JK05 382 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 MED19A0JLT2 244 aaPredicted RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 C17orf102A2RUQ5 167 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 PGPEP1LA6NFU8 196 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 KCNU1A8MYU2 1149 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 RBMXL2O75526 392 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 GNA14O95837 355 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ATP5F1P24539 256 aaPredicted RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 UBA7P41226 1012 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 LAMB3Q13751 1172 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 GPNMBQ14956 572 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ALG11Q2TAA5 492 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 CFAP221Q4G0U5 840 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 SPECC1Q5M775 1068 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 SUMO4Q6EEV6 95 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ANKRD54Q6NXT1 300 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 WDR59Q6PJI9 974 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 KDM7AQ6ZMT4 941 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 CROCCP2Q86T23 111 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TDRPQ86YL5 185 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 C4orf32Q8N8J7 132 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 DBF4BQ8NFT6 615 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 SH3KBP1Q96B97 665 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF689Q96CS4 500 aaPredicted RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 SORCS2Q96PQ0 1159 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 NCAPGQ9BPX3 1015 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 POLDIP3Q9BY77 421 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 IFIH1Q9BYX4 1025 aaKnown RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 TLE6Q9H808 572 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 ACTR5Q9H9F9 607 aaPredicted RBP4.26□□□□□ -1.73
LINC00561-201ENST00000565815 VPS54Q9P1Q0 977 aa4.26□□□□□ -1.73
LINC00561-201ENST00000565815 MYO9BQ13459 2157 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 ESYT2A0FGR8 921 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 KLRC4O43908 158 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 DOK2O60496 412 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 TBX10O75333 385 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 STAM2O75886 525 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms