RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 EMC1Q8N766 993 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 SPATA3Q8NHX4 192 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 TEKT4Q8WW24 435 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CENPIQ92674 756 aaPredicted RBP8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 ZNF501Q96CX3 271 aaPredicted RBP8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CXorf40BQ96DE9 158 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 MRFAP1L1Q96HT8 127 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 AGAP4Q96P64 663 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 PSKH2Q96QS6 385 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CD180Q99467 661 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 AGAP2Q99490 1192 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 C17orf62Q9BQA9 187 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 RIOK2Q9BVS4 552 aaKnown RBP8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 RAB6CQ9H0N0 254 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CARD9Q9H257 536 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 SP110Q9HB58 689 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 FANCEQ9HB96 536 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 NLRC4Q9NPP4 1024 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 POT1Q9NUX5 634 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 AIPL1Q9NZN9 384 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 LUC7L2Q9Y383 392 aaKnown RBP8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 PPIL1Q9Y3C6 166 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 PCDHGB6Q9Y5F9 930 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 PCYT1BQ9Y5K3 369 aaPredicted RBP8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 DOCK4Q8N1I0 1966 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 MDC1Q14676 2089 aaKnown RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 NPIPB15A6NHN6 443 aaPredicted RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 PDZK1P1A8MUH7 402 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 F8VZ95 297 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 NUAK1O60285 661 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 ZBTB11O95625 1053 aaPredicted RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 ESRRAP11474 423 aaPredicted RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 ZNF30P17039 623 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 FECHP22830 423 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 PTPN9P43378 593 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 ZBED6P86452 979 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 PTSQ03393 145 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 IL10RBQ08334 325 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 AIMP2Q13155 320 aaKnown RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 GPR18Q14330 331 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 NCF4Q15080 339 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 GPR19Q15760 415 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 C2CD6Q53TS8 623 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 DNTTIP2Q5QJE6 756 aaKnown RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 ARMC12Q5T9G4 340 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 SCYL2Q6P3W7 929 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 IGFL2Q6UWQ7 119 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 ABRAXAS1Q6UWZ7 409 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 TRIM72Q6ZMU5 477 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 VSTM4Q8IW00 320 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 RAVER1Q8IY67 606 aaKnown RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 PYROXD2Q8N2H3 581 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 CELF6Q96J87 481 aaKnown RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 CNDP1Q96KN2 507 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 NSMCE3Q96MG7 304 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 MCCC1Q96RQ3 725 aaPredicted RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 MAP3K3Q99759 626 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 SLC39A8Q9C0K1 460 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 GSX1Q9H4S2 264 aaPredicted RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 ACTR5Q9H9F9 607 aaPredicted RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 SYTL2Q9HCH5 934 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 P4HTMQ9NXG6 502 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 SERTAD3Q9UJW9 196 aa8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 CNOT6Q9ULM6 557 aaKnown RBP8.84□□□□□ -0.99
VPS9D1-205ENST00000565452 MAP1AP78559 2803 aaPredicted RBP8.83□□□□□ -1
VPS9D1-205ENST00000565452 ZGRF1Q86YA3 2104 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 TLCD2A6NGC4 264 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 MAP3K7O43318 606 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 MTA2O94776 668 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 CLDN14O95500 239 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 LSM8O95777 96 aaKnown RBP8.83□□□□□ -1
VPS9D1-205ENST00000565452 HBQ1P09105 142 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 CTPS1P17812 591 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 TNFAIP3P21580 790 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 IDSP22304 550 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 HTR7P34969 479 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 RORAP35398 523 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 HSPA9P38646 679 aaKnown RBP8.83□□□□□ -1
VPS9D1-205ENST00000565452 PRKCIP41743 596 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 CA7P43166 264 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 KLK7P49862 253 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 APBA1Q02410 837 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 RBPJQ06330 500 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 LTBQ06643 244 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 Q0VFX4 171 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 LBRQ14739 615 aaKnown RBP8.83□□□□□ -1
VPS9D1-205ENST00000565452 PRKD1Q15139 912 aaPredicted RBP8.83□□□□□ -1
VPS9D1-205ENST00000565452 CYP2A13Q16696 494 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 MLIPQ5VWP3 458 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 LRRC66Q68CR7 880 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 DUS1LQ6P1R4 473 aaKnown RBP8.83□□□□□ -1
VPS9D1-205ENST00000565452 WASH2PQ6VEQ5 465 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 CERS6Q6ZMG9 384 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 IRF2BP2Q7Z5L9 587 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 SYTL1Q8IYJ3 562 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 CARFQ8N187 725 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 TTC30BQ8N4P2 665 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 OR8K1Q8NGG5 319 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 OR1N1Q8NGS0 311 aa8.83□□□□□ -1
VPS9D1-205ENST00000565452 FAM172AQ8WUF8 416 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms