RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 NPEPPSL1A6NEC2 478 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 CDK14O94921 469 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 BST1Q10588 318 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 FZD5Q13467 585 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 BOP1Q14137 746 aaKnown RBP21.62■■□□□ 1.05
LINC01960-201ENST00000563759 MYO1HQ8N1T3 1032 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 BEND7Q8N7W2 519 aaPredicted RBP21.62■■□□□ 1.05
LINC01960-201ENST00000563759 HHIPQ96QV1 700 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 OR2AG1Q9H205 316 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 OXSMQ9NWU1 459 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 RNF112Q9ULX5 631 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 LRRC72A6NJI9 287 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 TRIM13O60858 407 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 SERPINE1P05121 402 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 ATP5F1P24539 256 aaPredicted RBP21.62■■□□□ 1.05
LINC01960-201ENST00000563759 CCR7P32248 378 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 CTSCP53634 463 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 OR4D1Q15615 310 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 TSNQ15631 228 aaKnown RBP21.62■■□□□ 1.05
LINC01960-201ENST00000563759 TMEM31Q5JXX7 168 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 LIPMQ5VYY2 423 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 PIWIL4Q7Z3Z4 852 aaKnown RBP21.62■■□□□ 1.05
LINC01960-201ENST00000563759 TP53I13Q8NBR0 393 aaPredicted RBP21.62■■□□□ 1.05
LINC01960-201ENST00000563759 STAG3L4Q8TBR4 150 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 ELMO1Q92556 727 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 WDR26Q9H7D7 661 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 TRIM39Q9HCM9 518 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 ITM2CQ9NQX7 267 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 MBNL1Q9NR56 388 aaKnown RBP21.62■■□□□ 1.05
LINC01960-201ENST00000563759 LATS2Q9NRM7 1088 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 C2orf42Q9NWW7 574 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 USP36Q9P275 1121 aaKnown RBP21.62■■□□□ 1.05
LINC01960-201ENST00000563759 MUTYHQ9UIF7 546 aa21.62■■□□□ 1.05
LINC01960-201ENST00000563759 CDC7O00311 574 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 KPNA5O15131 536 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 SGTAO43765 313 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 DLX3O60479 287 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 PRLHRP49683 370 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 CDK3Q00526 305 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 STX3Q13277 289 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 ACSBG2Q5FVE4 666 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 ADGRG6Q86SQ4 1221 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 TRAPPC5Q8IUR0 188 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 CCDC126Q96EE4 140 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 SGK2Q9HBY8 427 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 KLHL42Q9P2K6 505 aa21.61■■□□□ 1.05
LINC01960-201ENST00000563759 EDF1O60869 148 aaKnown RBP21.6■■□□□ 1.05
LINC01960-201ENST00000563759 KERAO60938 352 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 SMIM24O75264 130 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 H2AFYO75367 372 aaKnown RBP21.6■■□□□ 1.05
LINC01960-201ENST00000563759 GRK2P25098 689 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 AOAHP28039 575 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 HSPA14Q0VDF9 509 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 ASPHQ12797 758 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 INPP5AQ14642 412 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 DOK6Q6PKX4 331 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 PJA1Q8NG27 643 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 OR2T34Q8NGX1 318 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 ZNF473Q8WTR7 871 aaKnown RBP21.6■■□□□ 1.05
LINC01960-201ENST00000563759 PDLIM5Q96HC4 596 aaKnown RBP21.6■■□□□ 1.05
LINC01960-201ENST00000563759 ATXN10Q9UBB4 475 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 EBF1Q9UH73 591 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 IKZF3Q9UKT9 509 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 NEMP2A6NFY4 417 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 SYCE1LA8MT33 242 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 SLC31A1O15431 190 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 VEGFDO43915 354 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 CBSLP0DN79 551 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 CBSP35520 551 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 SYTL3Q4VX76 610 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 TMEM220Q6QAJ8 160 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 COX14Q96I36 57 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 ATOH8Q96SQ7 321 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 CYP4F12Q9HCS2 524 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 FZD3Q9NPG1 666 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 FAM8A1Q9UBU6 413 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 CYP8B1Q9UNU6 501 aa21.6■■□□□ 1.05
LINC01960-201ENST00000563759 ZFC3H1O60293 1989 aaKnown RBP21.59■■□□□ 1.05
LINC01960-201ENST00000563759 A8MT66 165 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 SUPT3HB4E1H0 165 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 SUPT3HO75486 399 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 SEMA4FO95754 770 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 ENO3P13929 434 aaPredicted RBP21.59■■□□□ 1.05
LINC01960-201ENST00000563759 TEAD1P28347 426 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 PRKAA2P54646 552 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 CES4AQ5XG92 561 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 FRA10AC1Q70Z53 315 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 ADAMTSL2Q86TH1 951 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 TRIM69Q86WT6 500 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 SLC22A9Q8IVM8 553 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 GJD3Q8N144 294 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 FUBP1Q96AE4 644 aaKnown RBP21.59■■□□□ 1.05
LINC01960-201ENST00000563759 ZNF514Q96K75 400 aaPredicted RBP21.59■■□□□ 1.05
LINC01960-201ENST00000563759 MYOCQ99972 504 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 EPHX3Q9H6B9 360 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 OR1A2Q9Y585 309 aa21.59■■□□□ 1.05
LINC01960-201ENST00000563759 CCDC189A1A4V9 331 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 UBXN8O00124 270 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 RAD51BO15315 384 aa21.58■■□□□ 1.05
LINC01960-201ENST00000563759 IPO13O94829 963 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms