RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 LY6KQ17RY6 165 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 AASDHQ4L235 1098 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CBWD6Q4V339 395 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 IFI44LQ53G44 452 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 FASTKD1Q53R41 847 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CBWD3Q5JTY5 395 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 KRT39Q6A163 491 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RAET1GQ6H3X3 334 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TMEM211Q6ICI0 200 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SULT1C3Q6IMI6 304 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC27A1Q6PCB7 646 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 GJB7Q6PEY0 223 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TMEM108Q6UXF1 575 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TMEM182Q6ZP80 229 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RNF144BQ7Z419 303 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ABI3BPQ7Z7G0 1075 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF410Q86VK4 478 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RASAL3Q86YV0 1011 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC22A9Q8IVM8 553 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 MFN1Q8IWA4 741 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 BBS5Q8N3I7 341 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SPERTQ8NA61 448 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 KBTBD3Q8NAB2 608 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 BEND2Q8NDZ0 799 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 OR13C2Q8NGS9 318 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 OR8K5Q8NH50 307 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 FAM110DQ8TAY7 271 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 GLMPQ8WWB7 406 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 MYLIPQ8WY64 445 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 DTD2Q96FN9 168 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 CCDC17Q96LX7 622 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 LRRC37BQ96QE4 947 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF577Q9BSK1 485 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 ABHD6Q9BV23 337 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 BOLA2Q9H3K6 86 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 FZD8Q9H461 694 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 DLL4Q9NR61 685 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC22A11Q9NSA0 550 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 PRMT7Q9NVM4 692 aaPredicted RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 SPG21Q9NZD8 308 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 KIAA1456Q9P272 454 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 IPO11Q9UI26 975 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 RBM8AQ9Y5S9 174 aaKnown RBP5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 TUBGCP6Q96RT7 1819 aa5.18□□□□□ -1.58
VPS35P1-201ENST00000563400 COL1A1P02452 1464 aaPredicted RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ERICH2A1L162 156 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 SH3D21A4FU49 640 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 FITM1A5D6W6 292 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 CAPN14A8MX76 684 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 F8WDY8 70 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 RNF113AO15541 343 aaKnown RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 NMT2O60551 498 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 SELENOFO60613 162 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF821O75541 412 aaPredicted RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 SCGB2A1O75556 95 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 MTRF1O75570 445 aaKnown RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 TOX4O94842 621 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 STAMBPO95630 424 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 FGF4P08620 206 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 CYP4B1P13584 511 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 TCF4P15884 667 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 TACR2P21452 398 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 AZGP1P25311 298 aaKnown RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ALDH4A1P30038 563 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 KCNQ1P51787 676 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ADCY7P51828 1080 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 PRRX1P54821 245 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 LOXL3P58215 753 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 SATB1Q01826 763 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 SPP2Q13103 211 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 SCGB2A2Q13296 93 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 KCNC3Q14003 757 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ZMYND11Q15326 602 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ATAD3BQ5T9A4 648 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 C20orf194Q5TEA3 1177 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 BRAT1Q6PJG6 821 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 USP30Q70CQ3 517 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 CXXC5Q7LFL8 322 aaKnown RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 GSTA5Q7RTV2 222 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ADAMTSL2Q86TH1 951 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ADIPOR2Q86V24 386 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 SPPL2CQ8IUH8 684 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF444Q8N0Y2 327 aaPredicted RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 CARFQ8N187 725 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 BATF2Q8N1L9 274 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 CFAP52Q8N1V2 620 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 CPXM2Q8N436 756 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 C11orf65Q8NCR3 313 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 OR5M3Q8NGP4 307 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ABHD4Q8TB40 342 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 C2CD4CQ8TF44 421 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 FAM151AQ8WW52 585 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 OVCA2Q8WZ82 227 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 ARHGEF26Q96DR7 871 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 NECTIN4Q96NY8 510 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 INPP5KQ9BT40 448 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 TPPP3Q9BW30 176 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 STMN4Q9H169 189 aaPredicted RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 CARD9Q9H257 536 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 RMND5AQ9H871 391 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms