RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CFAP99D6REC4 459 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 KLK8O60259 260 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 MAGEC1O60732 1142 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 DCTN3O75935 186 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 NCF1P14598 390 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 AOAHP28039 575 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 SERPINB5P36952 375 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 RGS4P49798 205 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 RPL14P50914 215 aaKnown RBP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 DPTQ07507 201 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 CCDC15Q0P6D6 951 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 FBXO48Q5FWF7 155 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 LDLRAP1Q5SW96 308 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 VWA5B1Q5TIE3 1220 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 SDE2Q6IQ49 451 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 FRMD7Q6ZUT3 714 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 ALYREFQ86V81 257 aaKnown RBP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 GPSM1Q86YR5 675 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 FBXO39Q8N4B4 442 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 ERP27Q96DN0 273 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 SIKE1Q9BRV8 207 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 KCTD5Q9NXV2 234 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 PLXNA2O75051 1894 aa17.77■□□□□ 0.44
COMMD4-208ENST00000563220 ATG2BQ96BY7 2078 aa17.77■□□□□ 0.44
COMMD4-208ENST00000563220 SUPT7LO94864 414 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 AP2A2O94973 939 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 MLLT1Q03111 559 aaPredicted RBP17.77■□□□□ 0.43
COMMD4-208ENST00000563220 SETDB1Q15047 1291 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 SMAD2Q15796 467 aaKnown RBP17.77■□□□□ 0.43
COMMD4-208ENST00000563220 SBSNQ6UWP8 590 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 MYO1HQ8N1T3 1032 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 BEND7Q8N7W2 519 aaPredicted RBP17.77■□□□□ 0.43
COMMD4-208ENST00000563220 RASGEF1AQ8N9B8 481 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 MAPK15Q8TD08 544 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 SKA1Q96BD8 255 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 WWP1Q9H0M0 922 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 COG4Q9H9E3 785 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 CD248Q9HCU0 757 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 TNFRSF12AQ9NP84 129 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 COL4A2P08572 1712 aa17.77■□□□□ 0.43
COMMD4-208ENST00000563220 IGLON5A6NGN9 336 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 OR2AG2A6NM03 316 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 MATN2O00339 956 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 UBFD1O14562 309 aaKnown RBP17.76■□□□□ 0.43
COMMD4-208ENST00000563220 AP1G1O43747 822 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 RNASEH2AO75792 299 aaKnown RBP17.76■□□□□ 0.43
COMMD4-208ENST00000563220 HOXB2P14652 356 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 TSPAN8P19075 237 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 GPR1P46091 355 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 IDH3AP50213 366 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 CTSCP53634 463 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 CDH13P55290 713 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 TMEM115Q12893 351 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-208ENST00000563220 STARD3Q14849 445 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 TGFBIQ15582 683 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 TTLL9Q3SXZ7 439 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 RAET1GQ6H3X3 334 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 NLRP8Q86W28 1048 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 TMPRSS6Q8IU80 811 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 DLG3Q92796 817 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 HLA-CQ95604 372 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 PRR11Q96HE9 360 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-208ENST00000563220 DNAJC28Q9NX36 388 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 UTP6Q9NYH9 597 aaKnown RBP17.76■□□□□ 0.43
COMMD4-208ENST00000563220 ADAMTS6Q9UKP5 1117 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-208ENST00000563220 CKAP5Q14008 2032 aa17.76■□□□□ 0.43
COMMD4-208ENST00000563220 H0YHG0 523 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 GRID2O43424 1007 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 TSPAN6O43657 245 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 TUBB3Q13509 450 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 GBX1Q14549 363 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 CRY1Q16526 586 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 PPP1R3AQ16821 1122 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 RAB44Q7Z6P3 723 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-208ENST00000563220 TRIM74Q86UV6 250 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 NSUN5Q96P11 429 aaKnown RBP17.75■□□□□ 0.43
COMMD4-208ENST00000563220 TMEM233B4DJY2 109 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 PPP6CO00743 305 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 PCDH8O95206 1070 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 CBSLP0DN79 551 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 CD72P21854 359 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 EEF1DP29692 281 aaKnown RBP17.75■□□□□ 0.43
COMMD4-208ENST00000563220 CBSP35520 551 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 AGTR2P50052 363 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 MRPS21P82921 87 aaKnown RBP17.75■□□□□ 0.43
COMMD4-208ENST00000563220 ZBTB16Q05516 673 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 HSPA14Q0VDF9 509 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 GALNT1Q10472 559 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-208ENST00000563220 BNIP1Q12981 228 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 EPGNQ6UW88 154 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 ADAMTSL2Q86TH1 951 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 CUZD1Q86UP6 607 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 PHYKPLQ8IUZ5 450 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 VRK3Q8IV63 474 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 PLA2G15Q8NCC3 412 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 RILPQ96NA2 401 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 FBXL12Q9NXK8 326 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 CD274Q9NZQ7 290 aa17.75■□□□□ 0.43
COMMD4-208ENST00000563220 ZFP69BQ9UJL9 534 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms