RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 C17orf113A0A1B0GUU1 675 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 TP73O15350 636 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 CD3EAPO15446 510 aaKnown RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 USP1O94782 785 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 VAPBO95292 243 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 GSTM1P09488 218 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 PBLDP30039 288 aaPredicted RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 RPL21P46778 160 aaKnown RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 ARCN1P48444 511 aaKnown RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 TTPAP49638 278 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 GSTM4Q03013 218 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 NFE2L1Q14494 772 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 ANKRD20A4Q4UJ75 823 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 CDCP2Q5VXM1 449 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 ABRAXAS1Q6UWZ7 409 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 FAM83HQ6ZRV2 1179 aaPredicted RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 SLC9B2Q86UD5 537 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 CACTIN-AS1Q8N1I8 211 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 AVL9Q8NBF6 648 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 BBOF1Q8ND07 529 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 KIF18AQ8NI77 898 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 HM13Q8TCT9 377 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 ZNF669Q96BR6 464 aaPredicted RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 STAMBPL1Q96FJ0 436 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 ERP44Q9BS26 406 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 ABCG4Q9H172 646 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 STN1Q9H668 368 aaKnown RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 VPS37BQ9H9H4 285 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 SARS2Q9NP81 518 aaKnown RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 MARCH4Q9P2E8 410 aaPredicted RBP16.42■□□□□ 0.22
CLK3-207ENST00000562389 KLK13Q9UKR3 277 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 MAD1L1Q9Y6D9 718 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 RPS6KL1Q9Y6S9 549 aa16.42■□□□□ 0.22
CLK3-207ENST00000562389 ZCWPW2A0A1B0GU75 182 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 RHPN2P1A8MT19 583 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 PDZK1P1A8MUH7 402 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 NTN3O00634 580 aaPredicted RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 PPM1DO15297 605 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 TCEA3O75764 348 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 BRAFP15056 766 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 XRCC1P18887 633 aaPredicted RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 GPR3P46089 330 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 MRPS25P82663 173 aaKnown RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 HHEXQ03014 270 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 DHX9Q08211 1270 aaKnown RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 BIRC2Q13490 618 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 SEPT7Q16181 437 aaKnown RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 ZNF658BQ4V348 819 aaPredicted RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 METRNLQ641Q3 311 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 XKR5Q6UX68 686 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 SPRED1Q7Z699 444 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 CCNJLQ8IV13 435 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 PDIK1LQ8N165 341 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 CLDN19Q8N6F1 224 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 GPR150Q8NGU9 434 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 FCRL3Q96P31 734 aaPredicted RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 TRIM56Q9BRZ2 755 aaKnown RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 CCM2Q9BSQ5 444 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 SCHIP1Q9P0W5 487 aaPredicted RBP16.41■□□□□ 0.22
CLK3-207ENST00000562389 WHRNQ9P202 907 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 SNX24Q9Y343 169 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 PRSS21Q9Y6M0 314 aa16.41■□□□□ 0.22
CLK3-207ENST00000562389 TRBV23OR9-2A0A075B6M9 112 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 ZW10O43264 779 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 OR1I1O60431 355 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 MT-CO3P00414 261 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 OR56A5P0C7T3 313 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 PGAM1P18669 254 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 SPINK2P20155 84 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 OGNP20774 298 aaKnown RBP16.4■□□□□ 0.22
CLK3-207ENST00000562389 RPL10P27635 214 aaKnown RBP16.4■□□□□ 0.22
CLK3-207ENST00000562389 DRG2P55039 364 aaKnown RBP16.4■□□□□ 0.22
CLK3-207ENST00000562389 CLDN6P56747 220 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 UBE2IP63279 158 aaKnown RBP16.4■□□□□ 0.22
CLK3-207ENST00000562389 TYSND1Q2T9J0 566 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 MSS51Q4VC12 460 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 DUPD1Q68J44 220 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 MRNIPQ6NTE8 343 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 LDB1Q86U70 411 aaPredicted RBP16.4■□□□□ 0.22
CLK3-207ENST00000562389 DCBLD1Q8N8Z6 715 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 EBNA1BP2Q99848 306 aaKnown RBP16.4■□□□□ 0.22
CLK3-207ENST00000562389 NAT9Q9BTE0 207 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 RAB17Q9H0T7 212 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 LRRN3Q9H3W5 708 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 CPNE7Q9UBL6 633 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 ACSL5Q9ULC5 683 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 CLCA2Q9UQC9 943 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 WDR37Q9Y2I8 494 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 UTP11Q9Y3A2 253 aaKnown RBP16.4■□□□□ 0.22
CLK3-207ENST00000562389 MSRB2Q9Y3D2 182 aa16.4■□□□□ 0.22
CLK3-207ENST00000562389 SPEGQ15772 3267 aa16.39■□□□□ 0.21
CLK3-207ENST00000562389 A0A1W2PQM1 296 aa16.39■□□□□ 0.21
CLK3-207ENST00000562389 F8W8V4 182 aa16.39■□□□□ 0.21
CLK3-207ENST00000562389 PRMT5O14744 637 aaPredicted RBP16.39■□□□□ 0.21
CLK3-207ENST00000562389 BANF1O75531 89 aa16.39■□□□□ 0.21
CLK3-207ENST00000562389 TTC4O95801 387 aa16.39■□□□□ 0.21
CLK3-207ENST00000562389 FTH1P02794 183 aa16.39■□□□□ 0.21
CLK3-207ENST00000562389 RPLP0P05388 317 aaKnown RBP16.39■□□□□ 0.21
CLK3-207ENST00000562389 POLBP06746 335 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms