RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 DBX2Q6ZNG2 339 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 KANSL1Q7Z3B3 1105 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 AMZ2Q86W34 360 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 GKN2Q86XP6 184 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 NRROSQ86YC3 692 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 CNTN4Q8IWV2 1026 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 SDR16C5Q8N3Y7 309 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 FSTL5Q8N475 847 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-221ENST00000561276 ZNF548Q8NEK5 533 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-221ENST00000561276 SCG3Q8WXD2 468 aaKnown RBP10.12□□□□□ -0.79
LRRC28-221ENST00000561276 LPGAT1Q92604 370 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 CDKL2Q92772 493 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 BIRC8Q96P09 236 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 OR2M4Q96R27 311 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 CCM2Q9BSQ5 444 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 LRRC61Q9BV99 259 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 TXLNGYQ9BZA5 131 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 P2RY12Q9H244 342 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 SMYD2Q9NRG4 433 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 KLC4Q9NSK0 619 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 ZFATQ9P243 1243 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 DOLKQ9UPQ8 538 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 DNAJC16Q9Y2G8 782 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 CSNK1G3Q9Y6M4 447 aa10.12□□□□□ -0.79
LRRC28-221ENST00000561276 CACNA1EQ15878 2313 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 C17orf113A0A1B0GUU1 675 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-221ENST00000561276 MGAT4DA6NG13 374 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 FAM159BA6NKW6 160 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 IQCF5A8MTL0 148 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 LMO7DNF2Z398 122 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 QSOX1O00391 747 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 KCNJ13O60928 360 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 C1QAP02745 245 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 TUBBP07437 444 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 ANXA6P08133 673 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 GIMD1P0DJR0 217 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 CD59P13987 128 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 RPS3P23396 243 aaKnown RBP eCLIP10.11□□□□□ -0.79
LRRC28-221ENST00000561276 GABRB3P28472 473 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 PBLDP30039 288 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-221ENST00000561276 ACTR1BP42025 376 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 PRLHRP49683 370 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 ADARP55265 1226 aaKnown RBP10.11□□□□□ -0.79
LRRC28-221ENST00000561276 ACTR1AP61163 376 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 ARHGAP8P85298 464 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 MPP1Q00013 466 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 SLC14A1Q13336 389 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 LRP8Q14114 963 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 DEFB133Q30KQ1 61 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 BCL7AQ4VC05 210 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 STPG1Q5TH74 334 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 PTRHD1Q6GMV3 140 aaKnown RBP10.11□□□□□ -0.79
LRRC28-221ENST00000561276 ZNF549Q6P9A3 640 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 ZNF449Q6P9G9 518 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 SLC30A9Q6PML9 568 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 LVRNQ6Q4G3 990 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 KIAA0408Q6ZU52 694 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 TRMT10CQ7L0Y3 403 aaKnown RBP10.11□□□□□ -0.79
LRRC28-221ENST00000561276 STRA8Q7Z7C7 330 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 LRRC6Q86X45 466 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 CTAGE3PQ8IX95 158 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 CFAP206Q8IYR0 622 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 FAM46DQ8NEK8 389 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 OR2L2Q8NH16 312 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 FAM122AQ96E09 287 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 LINC00615Q96LM1 132 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-221ENST00000561276 TIMM29Q9BSF4 260 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 GSDMCQ9BYG8 508 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 KRTAP3-3Q9BYR6 98 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 KRTAP3-2Q9BYR7 98 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 SPATS2LQ9NUQ6 558 aaKnown RBP10.11□□□□□ -0.79
LRRC28-221ENST00000561276 NSMCE4AQ9NXX6 385 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 SLC17A6Q9P2U8 582 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 GULP1Q9UBP9 304 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 FAM8A1Q9UBU6 413 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 RAB21Q9UL25 225 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 KCNK6Q9Y257 313 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 PCDHB1Q9Y5F3 818 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 PCDHGB2Q9Y5G2 931 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 PSAT1Q9Y617 370 aa10.11□□□□□ -0.79
LRRC28-221ENST00000561276 F8W8V4 182 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 TPP1O14773 563 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 FFAR2O15552 330 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 RIPK2O43353 540 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 TRIM16O95361 564 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 FTH1P02794 183 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 ESR1P03372 595 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 PKMP14618 531 aaKnown RBP10.1□□□□□ -0.79
LRRC28-221ENST00000561276 VCLP18206 1134 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 CHRM3P20309 590 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 STX2P32856 288 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 CLCNKAP51800 687 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 NFE2L1Q14494 772 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 SLC29A2Q14542 456 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 BRD3Q15059 726 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 CTSL3PQ5NE16 218 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 METRNLQ641Q3 311 aa10.1□□□□□ -0.79
LRRC28-221ENST00000561276 GALNT7Q86SF2 657 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms