RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 J3KR12 359 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ENPP3O14638 875 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 LDLRP01130 860 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SLC35E2BP0CK96 405 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 HAPLN1P10915 354 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SELPP16109 830 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 CXCR2P25025 360 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 POLD2P49005 469 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 RENBPP51606 427 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ARPP19P56211 112 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 EPS8Q12929 822 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 CTBP1Q13363 440 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 KRR1Q13601 381 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ZNF181Q2M3W8 571 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 CHST15Q7LFX5 561 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 KDELC2Q7Z4H8 507 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 THAP5Q7Z6K1 395 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 MFSD6LQ8IWD5 586 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ABI1Q8IZP0 508 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SDR16C5Q8N3Y7 309 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 OR7A2PQ8NGA2 310 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ANGPTL6Q8NI99 470 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 RAET1EQ8TD07 263 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 MAGEE2Q8TD90 523 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 IMP4Q96G21 291 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SCYL1Q96KG9 808 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SNX18Q96RF0 628 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ATXN3LQ9H3M9 355 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ARNT2Q9HBZ2 717 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 EML4Q9HC35 981 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ATP13A1Q9HD20 1204 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 NT5MQ9NPB1 228 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 OLA1Q9NTK5 396 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 MARCH5Q9NX47 278 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 CCDC167Q9P0B6 97 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 NDUFAF1Q9Y375 327 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 NAALAD2Q9Y3Q0 740 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SNX5Q9Y5X3 404 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ARVCFO00192 962 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 NBNO60934 754 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 GPC4O75487 556 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 ALX3O95076 343 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 SNAP29O95721 258 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 PTTG1O95997 202 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 PAMP19021 973 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 SAT1P21673 171 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 SLC1A2P43004 574 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 CCR10P46092 362 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 GATMP50440 423 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 KPNA2P52292 529 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 TAF10Q12962 218 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 GPNMBQ14956 572 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 PLCL1Q15111 1095 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 PCSK7Q16549 785 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 PRSS48Q7RTY5 328 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 MIB1Q86YT6 1006 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 SPPL2CQ8IUH8 684 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 PXYLP1Q8TE99 480 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 IGSF8Q969P0 613 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 TP53INP1Q96A56 240 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 CLSTN3Q9BQT9 956 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 PRKD2Q9BZL6 878 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 MARCH2Q9P0N8 246 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 PCDHB7Q9Y5E2 793 aa13.81□□□□□ -0.2
RABGGTA-220ENST00000560998 MTMR11A4FU01 709 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 M0R3G1 203 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 NME4O00746 187 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 VNN2O95498 520 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 HPRP00739 348 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 IGLV3-27P01718 113 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 HTR1BP28222 390 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 ELK4P28324 431 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 MZF1P28698 734 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 IL12AP29459 219 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 AVPR1AP37288 418 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 CASP3P42574 277 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 SLC11A1P49279 550 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 PGGT1BP53609 377 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 SLC10A7Q0GE19 358 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 POLD3Q15054 466 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 C10orf120Q5SQS8 335 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 MARC1Q5VT66 337 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 RAP1GAP2Q684P5 730 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 KIAA1841Q6NSI8 718 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 FBXL22Q6P050 247 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 RSPO2Q6UXX9 243 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 PIWIL3Q7Z3Z3 882 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 ADCK1Q86TW2 530 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 CENPLQ8N0S6 344 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 C8orf59Q8N0T1 100 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 TEX26Q8N6G2 289 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 C2CD4AQ8NCU7 369 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 SUN5Q8TC36 379 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 FAM110BQ8TC76 370 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 KCTD4Q8WVF5 259 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 MUS81Q96NY9 551 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 KLHL5Q96PQ7 755 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms