RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 TOR2AQ5JU69 321 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 TTC22Q5TAA0 569 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 ADALQ6DHV7 355 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 ZNF529Q6P280 563 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 ZNF517Q6ZMY9 492 aaPredicted RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 Q71RC1 249 aaPredicted RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 PARS2Q7L3T8 475 aaKnown RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 TAOK1Q7L7X3 1001 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 C1QL2Q7Z5L3 287 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 PARGQ86W56 976 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 APLFQ8IW19 511 aaPredicted RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 RBFAQ8N0V3 343 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 RBMXL3Q8N7X1 1067 aaKnown RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 ARL10Q8N8L6 244 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 Q8N9G6 341 aaPredicted RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 KDM1BQ8NB78 822 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 NLGN4YQ8NFZ3 816 aaPredicted RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 ARSGQ96EG1 525 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 BICD1Q96G01 975 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 MED15Q96RN5 788 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 TIMP4Q99727 224 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 SMOQ99835 787 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 AIFM2Q9BRQ8 373 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 EFHD1Q9BUP0 239 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 LRRC61Q9BV99 259 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 DDA1Q9BW61 102 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 CXXC4Q9H2H0 198 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 DDX19AQ9NUU7 478 aaKnown RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 TMEM140Q9NV12 185 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 SLC17A6Q9P2U8 582 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 COPG2Q9UBF2 871 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 SPASTQ9UBP0 616 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 STOML2Q9UJZ1 356 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 APPL1Q9UKG1 709 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 SCML2Q9UQR0 700 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 ACTL7AQ9Y615 435 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 SHANK1Q9Y566 2161 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 JMJD1CQ15652 2540 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 CKAP5Q14008 2032 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 CROCCQ5TZA2 2017 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 ITIH6Q6UXX5 1313 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 ARHGEF17Q96PE2 2063 aaPredicted RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 EDDM13A0A1B0GTR0 161 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 ZSCAN5CA6NGD5 496 aaPredicted RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 FAM171A2A8MVW0 826 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 HHLA1C9JL84 531 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 CCER2I3L3R5 266 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 RNF103O00237 685 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 DTNBO60941 627 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 TACC1O75410 805 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 PAK4O96013 591 aaPredicted RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 KRT19P08727 400 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 FAM163BP0C2L3 166 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 COX6B1P14854 86 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 NFKBIAP25963 317 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 SSTR2P30874 369 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 AKT2P31751 481 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 CCT6AP40227 531 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 CSKP41240 450 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 PGDP52209 483 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 COPB1P53618 953 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 PER3P56645 1201 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 PROK1P58294 105 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 NOMO3P69849 1222 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 B4GALNT1Q00973 533 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 SRSF2Q01130 221 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 FAPQ12884 760 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 SEMA5AQ13591 1074 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 ERV3-1Q14264 604 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 NOMO1Q15155 1222 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 C10orf120Q5SQS8 335 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 PIP5KL1Q5T9C9 394 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 TMEM198Q66K66 360 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 SEL1L3Q68CR1 1132 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 NEK5Q6P3R8 708 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 KYAT3Q6YP21 454 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 NOP9Q86U38 636 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 HORMAD1Q86X24 394 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 SFTPA2Q8IWL1 248 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 SH2D3CQ8N5H7 860 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 C4orf32Q8N8J7 132 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 BMPERQ8N8U9 685 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 B3GALNT2Q8NCR0 500 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 ERMNQ8TAM6 284 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 ACTRT2Q8TDY3 377 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 ITLN2Q8WWU7 325 aaPredicted RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 STON2Q8WXE9 905 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 ART4Q93070 314 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 PNPLA2Q96AD5 504 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 TMA16Q96EY4 203 aaKnown RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 HPDLQ96IR7 371 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 TBATAQ96M53 351 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 HAPLN3Q96S86 360 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 FIZ1Q96SL8 496 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 KLF6Q99612 283 aaPredicted RBP3.79□□□□□ -1.8
HERC1-211ENST00000560983 SMR3AQ99954 134 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 TIPINQ9BVW5 301 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 C1QTNF7Q9BXJ2 289 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 DCLK3Q9C098 648 aa3.79□□□□□ -1.8
HERC1-211ENST00000560983 INTS2Q9H0H0 1204 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms