RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SYT11Q9BT88 431 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 NUP85Q9BW27 656 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 CEP41Q9BYV8 373 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 FANCEQ9HB96 536 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 BPIFA1Q9NP55 256 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 SLC40A1Q9NP59 571 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 IMP3Q9NV31 184 aaKnown RBP10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 FAM8A1Q9UBU6 413 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 AMACRQ9UHK6 382 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF711Q9Y462 761 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 CRYBG3Q68DQ2 2970 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 NBPF19A0A087WUL8 3843 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 GOLGA6L3A6NEY3 463 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 F5H423 210 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 KCNK1O00180 336 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 CHUKO15111 745 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 TMEM63AO94886 807 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 BRAFP15056 766 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 MX2P20592 715 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 FECHP22830 423 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 VARSP26640 1264 aaKnown RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 TNNT3P45378 269 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 ARCN1P48444 511 aaKnown RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC25A11Q02978 314 aaKnown RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 AP1B1Q10567 949 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 XRCC4Q13426 336 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 PAFAH1B3Q15102 231 aaKnown RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 STX1AQ16623 288 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 FILIP1LQ4L180 1135 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC6A19Q695T7 634 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 PDPK2PQ6A1A2 396 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 ALG1LQ6GMV1 187 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 ABRAXAS1Q6UWZ7 409 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 SRRM1Q8IYB3 904 aaKnown RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 ENDOVQ8N8Q3 282 aaKnown RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 FDCSPQ8NFU4 85 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 GPR150Q8NGU9 434 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 C5orf34Q96MH7 638 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 FCRL4Q96PJ5 515 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 CHST8Q9H2A9 424 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 GPR83Q9NYM4 423 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 EPHA6Q9UF33 1036 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 ADGRG1Q9Y653 693 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 CFAP20Q9Y6A4 193 aaKnown RBP10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 PIKFYVEQ9Y2I7 2098 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 CENPEQ02224 2701 aa10.27□□□□□ -0.77
CDC42BPB-207ENST00000560492 HIVEP3Q5T1R4 2406 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 TLCD2A6NGC4 264 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 MYO1FO00160 1098 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 KRT86O43790 486 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 RRADP55042 308 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 GSDMDP57764 484 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 DCDC1P59894 354 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 HSD11B2P80365 405 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 GBE1Q04446 702 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 CDK18Q07002 472 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 TMEM115Q12893 351 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 GPS2Q13227 327 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 DPYSL3Q14195 570 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 KRT33BQ14525 404 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 FAM182AQ5T1J6 154 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 CCDC183Q5T5S1 534 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 AGAP9Q5VTM2 703 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 AMZ2Q86W34 360 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 BPHLQ86WA6 291 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 OOSP2Q86WS3 158 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 MAP7D3Q8IWC1 876 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 SGSM3Q96HU1 749 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC41A2Q96JW4 573 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 TSGA13Q96PP4 275 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 NUDT9Q9BW91 350 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 ZCCHC2Q9C0B9 1178 aaKnown RBP10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 THAP2Q9H0W7 228 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 CBX8Q9HC52 389 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 KCND1Q9NSA2 647 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 HRASLS2Q9NWW9 162 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 WDR37Q9Y2I8 494 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 PCDHGB7Q9Y5F8 929 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 HEY1Q9Y5J3 304 aa10.26□□□□□ -0.77
CDC42BPB-207ENST00000560492 ITPR2Q14571 2701 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 CCDC88CQ9P219 2028 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 ZBTB11O95625 1053 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 CLDN1O95832 211 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 MMP2P08253 660 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 BPIP17213 487 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 CYP2A7P20853 494 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 CDH3P22223 829 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 OTX2P32243 289 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 VAV2P52735 878 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 TUBB4BP68371 445 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 PRKAA1Q13131 559 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 TUBB2AQ13885 445 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 NAA30Q147X3 362 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 RPE65Q16518 533 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 PPP2R5EQ16537 467 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 ATP13A4Q4VNC1 1196 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 KHDC1Q4VXA5 237 aaKnown RBP10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 FAM69BQ5VUD6 431 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms