RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ADRB1P08588 477 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 ACP5P13686 325 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 F3P13726 295 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 FASLGP48023 281 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 PRLHRP49683 370 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 ARSDP51689 593 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 PLOD1Q02809 727 aaPredicted RBP13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 HIF1AQ16665 826 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 CLPPQ16740 277 aaPredicted RBP13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 AGAP9Q5VTM2 703 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 SLC30A9Q6PML9 568 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 SDCCAG8Q86SQ7 713 aaPredicted RBP13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 SERPINA9Q86WD7 417 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 LRRC6Q86X45 466 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 ZNF547Q8IVP9 402 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 SLC35F3Q8IY50 421 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 RASGEF1AQ8N9B8 481 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 OR2L2Q8NH16 312 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 FBXO25Q8TCJ0 367 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 CALML6Q8TD86 181 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 ZNF778Q96MU6 729 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 ZIM3Q96PE6 472 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 FMO2Q99518 471 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 CATSPERZQ9NTU4 200 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 TOR4AQ9NXH8 423 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 PADI4Q9UM07 663 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 DCHS1Q96JQ0 3298 aa13.77□□□□□ -0.21
PKNOX1-209ENST00000560448 ZFC3H1O60293 1989 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 LY6G6EA0A0G2JKS1 128 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 SPAARA0A1B0GVQ0 90 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 MGAT4DA6NG13 374 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 PRR19A6NJB7 356 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 GIPC1O14908 333 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 GPR39O43194 453 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 FTH1P02794 183 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 CELA2BP08218 269 aaPredicted RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 PGAM1P18669 254 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 OGNP20774 298 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 IDSP22304 550 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 AK4P27144 223 aaPredicted RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 HSD17B3P37058 310 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 GPR3P46089 330 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 PLTPP55058 493 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 ADARP55265 1226 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 ARL4CP56559 192 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 KHDC1Q4VXA5 237 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 ZNF449Q6P9G9 518 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 TMEM220Q6QAJ8 160 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 CRTC3Q6UUV7 619 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 C11orf96Q7Z7L8 435 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 RBM12BQ8IXT5 1001 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 GPR150Q8NGU9 434 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 CCL4L1Q8NHW4 92 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 SH3KBP1Q96B97 665 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 GRAMD1AQ96CP6 724 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 MFSD3Q96ES6 412 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 STAMBPL1Q96FJ0 436 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 SIGLEC10Q96LC7 697 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 FOXP3Q9BZS1 431 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 SUDS3Q9H7L9 328 aaPredicted RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 KLC4Q9NSK0 619 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 SLC2A6Q9UGQ3 507 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 ACSL5Q9ULC5 683 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 RPS6KL1Q9Y6S9 549 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 U3KQA8 63 aa13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 CNOT1A5YKK6 2376 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-209ENST00000560448 GOLGA8MH3BSY2 632 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 EIF3HO15372 352 aaKnown RBP eCLIP13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 CD3EAPO15446 510 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 NOBOXO60393 691 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 AVILO75366 819 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 TCEA3O75764 348 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 POP7O75817 140 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 OR56A5P0C7T3 313 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 NMBRP28336 390 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 HALP42357 657 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 ITGA8P53708 1063 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 CRADDP78560 199 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 DHX9Q08211 1270 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 RPA4Q13156 261 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 NR1D2Q14995 579 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 DBN1Q16643 649 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 ANKRD20A4Q4UJ75 823 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 FNBP1LQ5T0N5 605 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 ABRAXAS1Q6UWZ7 409 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 LRIG3Q6UXM1 1119 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 SLC9B2Q86UD5 537 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 TMPRSS12Q86WS5 348 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 PIANPQ8IYJ0 282 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 NAGSQ8N159 534 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 IFI44Q8TCB0 444 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 HM13Q8TCT9 377 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 MAPK15Q8TD08 544 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 EBNA1BP2Q99848 306 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 SARS2Q9NP81 518 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms