RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 COMMD2Q86X83 199 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 MMP21Q8N119 569 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SCML4Q8N228 414 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SPC24Q8NBT2 197 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 OR1J2Q8NGS2 313 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CEP76Q8TAP6 659 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SECISBP2LQ93073 1101 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ABHD8Q96I13 439 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 GAL3ST4Q96RP7 486 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 KXD1Q9BQD3 176 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 BTBD10Q9BSF8 475 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SPAG4Q9NPE6 437 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 GPR108Q9NPR9 543 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 THSD1Q9NS62 852 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 DDX43Q9NXZ2 648 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CNOT8Q9UFF9 292 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 TEKT2Q9UIF3 430 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 RCOR1Q9UKL0 485 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRDM4Q9UKN5 801 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ST3GAL5Q9UNP4 418 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 R3HDM2Q9Y2K5 976 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 LOC102723996A0A087X1L8 192 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 A0A0U1RQJ8 604 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 RNF103-CHMP3A0A140T963 221 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ELOVL7A1L3X0 281 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 C17orf100A8MU93 164 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 KBTBD13C9JR72 458 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 RNF103O00237 685 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 LDLRAD4O15165 306 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 SSX4O60224 188 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 NKX2-2O95096 273 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 LATS1O95835 1130 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 DANCRP0C864 163 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CCDC192P0DO97 292 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 LYL1P12980 280 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CHRNB2P17787 502 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CA6P23280 308 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ITGB8P26012 769 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 STIP1P31948 543 aaKnown RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 HADHAP40939 763 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 HNF4AP41235 474 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ALDH3B1P43353 468 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 TAS2R38P59533 333 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 HNRNPA0Q13151 305 aaKnown RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 SGCGQ13326 291 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ITGA7Q13683 1181 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 DECR1Q16698 335 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 MEP1AQ16819 746 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ASTE1Q2TB18 679 aaPredicted RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 DDI2Q5TDH0 399 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 NOTUMQ6P988 496 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CFAP77Q6ZQR2 320 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 C15orf39Q6ZRI6 1047 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 DPPA4Q7L190 304 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CENPVQ7Z7K6 275 aaPredicted RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 FOXP4Q8IVH2 680 aaPredicted RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 TUSC5Q8IXB3 177 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 PALM2Q8IXS6 379 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CADM3Q8N126 398 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 NUP93Q8N1F7 819 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 PARP16Q8N5Y8 322 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 KDM1BQ8NB78 822 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ATAD1Q8NBU5 361 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 BEST4Q8NFU0 473 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CKAP2Q8WWK9 683 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 TAF4BQ92750 862 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 COQ8BQ96D53 544 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CDHR1Q96JP9 859 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 LMLNQ96KR4 655 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 SFXN2Q96NB2 322 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 NTPCRQ9BSD7 190 aaKnown RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 FUT8Q9BYC5 575 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 FN3KQ9H479 309 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 TSPY26PQ9H489 355 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 AAMDCQ9H7C9 122 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 HHATLQ9HCP6 504 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CNGB3Q9NQW8 809 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 POLE3Q9NRF9 147 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 HAO2Q9NYQ3 351 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 LARSQ9P2J5 1176 aaKnown RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 MAD2L2Q9UI95 211 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 FZD10Q9ULW2 581 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 LOXL2Q9Y4K0 774 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 SNX5Q9Y5X3 404 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 TRBV5-3A0A0A0MS03 114 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 TRAV24A0A0B4J272 114 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 IGLV5-39A0A0G2JS06 123 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 A0A1W2PN81 502 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM8BA6NDV4 472 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CXorf65A6NEN9 183 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 A8MV72 311 aaPredicted RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 SMIM22K7EJ46 135 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 RRHO14718 337 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 NARSO43776 548 aaKnown RBP1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 VNN2O95498 520 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 RLN1P04808 185 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CYP21A2P08686 494 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 GNLYP22749 145 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 DGKAP23743 735 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CHRNA7P36544 502 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms