RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZNF883P0CG24 379 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 VCLP18206 1134 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 ITGB6P18564 788 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 ACTR1BP42025 376 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 LEPRP48357 1165 aaKnown RBP20.93■□□□□ 0.94
CASC4-204ENST00000557945 ACTR1AP61163 376 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 SUZ12Q15022 739 aaKnown RBP20.93■□□□□ 0.94
CASC4-204ENST00000557945 C11orf96Q7Z7L8 435 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 GKN2Q86XP6 184 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 SLC25A45Q8N413 288 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 UHMK1Q8TAS1 419 aaKnown RBP20.93■□□□□ 0.94
CASC4-204ENST00000557945 GPBAR1Q8TDU6 330 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 FAM122AQ96E09 287 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 TIMM29Q9BSF4 260 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 CCM2Q9BSQ5 444 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 P2RY12Q9H244 342 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 CCDC68Q9H2F9 335 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 OSGEPL1Q9H4B0 414 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 TXNDC16Q9P2K2 825 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 PCDHB1Q9Y5F3 818 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 DNMT3AQ9Y6K1 912 aaPredicted RBP20.93■□□□□ 0.94
CASC4-204ENST00000557945 FAM186AA6NE01 2351 aa20.93■□□□□ 0.94
CASC4-204ENST00000557945 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.92■□□□□ 0.94
CASC4-204ENST00000557945 FAM159BA6NKW6 160 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 IQCF5A8MTL0 148 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 CXorf49A8MYA2 514 aaPredicted RBP20.92■□□□□ 0.94
CASC4-204ENST00000557945 PCDHGA12O60330 932 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 TRIM16O95361 564 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 ESR1P03372 595 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 RPS3P23396 243 aaKnown RBP eCLIP20.92■□□□□ 0.941e-8■■■□□ 19
CASC4-204ENST00000557945 ABCG1P45844 678 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 DEFB133Q30KQ1 61 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 KBTBD12Q3ZCT8 623 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 CNSTQ6PJW8 725 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 STRA8Q7Z7C7 330 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 SLC26A11Q86WA9 606 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 NRROSQ86YC3 692 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 PPM1NQ8N819 430 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 TSSK1BQ9BXA7 367 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 TXLNGYQ9BZA5 131 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 NSMCE4AQ9NXX6 385 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 PSAT1Q9Y617 370 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 CSNK1G3Q9Y6M4 447 aa20.92■□□□□ 0.94
CASC4-204ENST00000557945 LMO7DNF2Z398 122 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 YY2O15391 372 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 SNX2O60749 519 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 AHSGP02765 367 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 PKMP14618 531 aaKnown RBP20.91■□□□□ 0.94
CASC4-204ENST00000557945 GABRB3P28472 473 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 CD151P48509 253 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 CTSL3PQ5NE16 218 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 STPG1Q5TH74 334 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 KANSL1Q7Z3B3 1105 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 KRT222Q8N1A0 295 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 FAM46DQ8NEK8 389 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 LINC00615Q96LM1 132 aaPredicted RBP20.91■□□□□ 0.94
CASC4-204ENST00000557945 BIRC8Q96P09 236 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 TAAR2Q9P1P5 351 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 RABGEF1Q9UJ41 708 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 RAB21Q9UL25 225 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 PCDHGB2Q9Y5G2 931 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 ST14Q9Y5Y6 855 aa20.91■□□□□ 0.94
CASC4-204ENST00000557945 BPTFQ12830 3046 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 A0A087WUV0 522 aaPredicted RBP20.9■□□□□ 0.94
CASC4-204ENST00000557945 MGAT4DA6NG13 374 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 H3BMM5 538 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 RIPK2O43353 540 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 ADARP55265 1226 aaKnown RBP20.9■□□□□ 0.94
CASC4-204ENST00000557945 ARHGAP8P85298 464 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 EFTUD2Q15029 972 aaKnown RBP eCLIP20.9■□□□□ 0.94
CASC4-204ENST00000557945 GALNT7Q86SF2 657 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 CFAP206Q8IYR0 622 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 SDR16C5Q8N3Y7 309 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 OR2L2Q8NH16 312 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 SETD7Q8WTS6 366 aaKnown RBP20.9■□□□□ 0.94
CASC4-204ENST00000557945 UBLCP1Q8WVY7 318 aaPredicted RBP20.9■□□□□ 0.94
CASC4-204ENST00000557945 ELMO1Q92556 727 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 MRRFQ96E11 262 aaKnown RBP20.9■□□□□ 0.94
CASC4-204ENST00000557945 PANX3Q96QZ0 392 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 CYTH2Q99418 400 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 DPEP2Q9H4A9 486 aa20.9■□□□□ 0.94
CASC4-204ENST00000557945 PTPRZ1P23471 2315 aaPredicted RBP20.89■□□□□ 0.94
CASC4-204ENST00000557945 FRYLO94915 3013 aa20.89■□□□□ 0.94
CASC4-204ENST00000557945 KCNJ13O60928 360 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 NIPSNAP2O75323 286 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 C1QAP02745 245 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 ALPPL2P10696 532 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 CHRM3P20309 590 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 SLC14A1Q13336 389 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 NFE2L1Q14494 772 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 SEPT7Q16181 437 aaKnown RBP20.89■□□□□ 0.93
CASC4-204ENST00000557945 INAVAQ3KP66 663 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 ZNF549Q6P9A3 640 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 EMBQ6PCB8 327 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 EID2Q8N6I1 236 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 HM13Q8TCT9 377 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 LKAAEAR1Q8TD35 194 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 AENQ8WTP8 325 aaKnown RBP20.89■□□□□ 0.93
CASC4-204ENST00000557945 FAM136AQ96C01 138 aa20.89■□□□□ 0.93
CASC4-204ENST00000557945 ATXN7L3BQ96GX2 97 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms