RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 RBM22Q9NW64 420 aaKnown RBP eCLIP12.26□□□□□ -0.45
PSEN1-221ENST00000557293 PCDHGA10Q9Y5H3 936 aa12.26□□□□□ -0.45
PSEN1-221ENST00000557293 TLCD2A6NGC4 264 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 TMCO5BA8MYB1 307 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 E2F3O00716 465 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 MATN3O15232 486 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 ZG16O60844 167 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 KLF7O75840 302 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-221ENST00000557293 MTA2O94776 668 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 CDK14O94921 469 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 KLK3P07288 261 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-221ENST00000557293 ATP1A3P13637 1013 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 DESP17661 470 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 PCK1P35558 622 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 ARL4AP40617 200 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 RRADP55042 308 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 ABRQ12979 859 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 RPE65Q16518 533 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 SMTNL2Q2TAL5 461 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 KRTAP21-3Q3LHN1 58 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 BOLA3Q53S33 107 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 ZNF569Q5MCW4 686 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 FAM182AQ5T1J6 154 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 ALS2CLQ60I27 953 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 LRRC49Q8IUZ0 686 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 TMEM151BQ8IW70 566 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 TRAM1L1Q8N609 369 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 OR8K5Q8NH50 307 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 LRRN4Q8WUT4 740 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 NUP85Q9BW27 656 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 PCMTD2Q9NV79 361 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 NFKBIL1Q9UBC1 381 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-221ENST00000557293 BTRCQ9Y297 605 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 ADGRG4Q8IZF6 3080 aa12.25□□□□□ -0.45
PSEN1-221ENST00000557293 OR5K3A6NET4 321 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 DDX3YO15523 660 aaKnown RBP12.24□□□□□ -0.45
PSEN1-221ENST00000557293 VEGFDO43915 354 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 HLA-DQB2P05538 268 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 GLRBP48167 497 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 SOX8P57073 446 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 DCDC1P59894 354 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 GALNT2Q10471 571 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 MMRN1Q13201 1228 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 ELOAQ14241 798 aaKnown RBP12.24□□□□□ -0.45
PSEN1-221ENST00000557293 MYBPC3Q14896 1274 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 LLGL1Q15334 1064 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 ZNF385CQ66K41 422 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-221ENST00000557293 FAM83HQ6ZRV2 1179 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-221ENST00000557293 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
PSEN1-221ENST00000557293 OR1L3Q8NH93 324 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 CCHCR1Q8TD31 782 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 CPT1BQ92523 772 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 HSPH1Q92598 858 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 FATE1Q969F0 183 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 SGSM3Q96HU1 749 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 TSGA13Q96PP4 275 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 TRIB3Q96RU7 358 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 CD180Q99467 661 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 ZSCAN5AQ9BUG6 496 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 TMEM63CQ9P1W3 806 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 AMACRQ9UHK6 382 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 G3BP2Q9UN86 482 aaKnown RBP12.24□□□□□ -0.45
PSEN1-221ENST00000557293 OSGIN2Q9Y236 505 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 CSAG2Q9Y5P2 127 aa12.24□□□□□ -0.45
PSEN1-221ENST00000557293 UBA6A0AVT1 1052 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-221ENST00000557293 MFSD11O43934 449 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 ZBTB11O95625 1053 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-221ENST00000557293 PIRTP0C851 137 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 BPIP17213 487 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 CCNCP24863 283 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 ITGA3P26006 1051 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 ARL4DP49703 201 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 ZNF165P49910 485 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 ARSEP51690 589 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 KPNA2P52292 529 aaKnown RBP12.23□□□□□ -0.45
PSEN1-221ENST00000557293 TMEM115Q12893 351 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-221ENST00000557293 PTCHD3Q3KNS1 767 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 DNTTIP2Q5QJE6 756 aaKnown RBP12.23□□□□□ -0.45
PSEN1-221ENST00000557293 PDPK2PQ6A1A2 396 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 CNTD1Q8N815 330 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 NEK11Q8NG66 645 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 ZFYVE1Q9HBF4 777 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.23□□□□□ -0.45
PSEN1-221ENST00000557293 HRASLS2Q9NWW9 162 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 PSMD13Q9UNM6 376 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 SHOC2Q9UQ13 582 aa12.23□□□□□ -0.45
PSEN1-221ENST00000557293 MED13LQ71F56 2210 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 ZGRF1Q86YA3 2104 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 CCDC88CQ9P219 2028 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 PRSS44E7EML9 344 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 FTLP02792 175 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-221ENST00000557293 CD48P09326 243 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 FERP16591 822 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 SERPINB6P35237 376 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 DMPKQ09013 629 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 SLC10A2Q12908 348 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-221ENST00000557293 NAA30Q147X3 362 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-221ENST00000557293 NCF4Q15080 339 aa12.22□□□□□ -0.45
PSEN1-221ENST00000557293 PAFAH1B3Q15102 231 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms