RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MYL2P10916 166 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 ANPEPP15144 967 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 PTPN2P17706 415 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 ALDH4A1P30038 563 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 ADRA1AP35348 466 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 GP5P40197 560 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 PGGT1BP53609 377 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 LIMK2P53671 638 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 SLC26A5P58743 744 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 NRG1Q02297 640 aaPredicted RBP5.05□□□□□ -1.6
TMEM260-210ENST00000556422 STX5Q13190 355 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 STX3Q13277 289 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 CAPRIN1Q14444 709 aaKnown RBP5.05□□□□□ -1.6
TMEM260-210ENST00000556422 DLG2Q15700 870 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 DGKKQ5KSL6 1271 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 N4BP2L1Q5TBK1 243 aaPredicted RBP5.05□□□□□ -1.6
TMEM260-210ENST00000556422 USP43Q70EL4 1123 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 KCTD20Q7Z5Y7 419 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 CLEC14AQ86T13 490 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 SCN4BQ8IWT1 228 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 CCDC36Q8IYA8 594 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 RTL3Q8N8U3 475 aaKnown RBP5.05□□□□□ -1.6
TMEM260-210ENST00000556422 PXYLP1Q8TE99 480 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 DNAJC9Q8WXX5 260 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 PTCD3Q96EY7 689 aaKnown RBP5.05□□□□□ -1.6
TMEM260-210ENST00000556422 AHCYL2Q96HN2 611 aaKnown RBP5.05□□□□□ -1.6
TMEM260-210ENST00000556422 COX4I2Q96KJ9 171 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 CPNE1Q99829 537 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 SEC22CQ9BRL7 303 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 CRB3Q9BUF7 120 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 SPATA16Q9BXB7 569 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 IL22Q9GZX6 179 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 SNX15Q9NRS6 342 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 RYDENQ9NUL5 291 aaKnown RBP5.05□□□□□ -1.6
TMEM260-210ENST00000556422 TMEM161AQ9NX61 479 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 TMEM216Q9P0N5 145 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 HEY2Q9UBP5 337 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 APOBEC2Q9Y235 224 aaKnown RBP5.05□□□□□ -1.6
TMEM260-210ENST00000556422 TLR6Q9Y2C9 796 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 COQ6Q9Y2Z9 468 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 REV3LO60673 3130 aa5.05□□□□□ -1.6
TMEM260-210ENST00000556422 FGF10O15520 208 aaPredicted RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ITM2AO43736 263 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 TBC1D4O60343 1298 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 CNOT4O95628 575 aaKnown RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 TBX18O95935 607 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 MOCS2O96007 188 aaPredicted RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 GSTM1P09488 218 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ESRRAP11474 423 aaPredicted RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 GM2AP17900 193 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 GABRB3P28472 473 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 RCVRNP35243 200 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 PBX3P40426 434 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 STARP49675 285 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 YBEYP58557 167 aaPredicted RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 IRX4P78413 519 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ZNF423Q2M1K9 1284 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 VWA5B1Q5TIE3 1220 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 WDR73Q6P4I2 378 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 KYAT3Q6YP21 454 aaKnown RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 USP51Q70EK9 711 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 LRRC8DQ7L1W4 858 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 RAB11FIP2Q7L804 512 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 R3HCC1LQ7Z5L2 792 aaKnown RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ZBTB46Q86UZ6 589 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ALYREFQ86V81 257 aaKnown RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 MON1AQ86VX9 555 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 MIB1Q86YT6 1006 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 MMAAQ8IVH4 418 aaKnown RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 DBF4BQ8NFT6 615 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 MYEOVQ96EZ4 313 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ATXN7L3BQ96GX2 97 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 CAPNS2Q96L46 248 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 CASD1Q96PB1 797 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 FCRL5Q96RD9 977 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 KIFC1Q9BW19 673 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 NMUR2Q9GZQ4 415 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 SAV1Q9H4B6 383 aaPredicted RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ZFP57Q9NU63 452 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 C20orf96Q9NUD7 363 aaPredicted RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 BFARQ9NZS9 450 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ENOPH1Q9UHY7 261 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ZFP69BQ9UJL9 534 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ADAM28Q9UKQ2 775 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 PCDHGA11Q9Y5H2 935 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 UNC80Q8N2C7 3258 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 IGLV3-10A0A075B6K4 115 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 E2F8A0AVK6 867 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 WASH4PA8MWX3 477 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ARVCFO00192 962 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 SYN3O14994 580 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 MATN3O15232 486 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 GLRA3O75311 464 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 LYPLA1O75608 230 aaPredicted RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 CNTN5O94779 1100 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 HTR7P34969 479 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 ARCN1P48444 511 aaKnown RBP5.04□□□□□ -1.6
TMEM260-210ENST00000556422 MAN2A2P49641 1150 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 CDK7P50613 346 aa5.04□□□□□ -1.6
TMEM260-210ENST00000556422 RPL10AP62906 217 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms