RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 MYBPC3Q14896 1274 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PCLAFQ15004 111 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 RAB30Q15771 203 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CNGA3Q16281 694 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CCL14Q16627 93 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CA9Q16790 459 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 SLC25A52Q3SY17 297 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 FBXO47Q5MNV8 452 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 LY6G5CQ5SRR4 150 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TREML2Q5T2D2 321 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TEDDM1Q5T9Z0 273 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 NXNQ6DKJ4 435 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 LAIR1Q6GTX8 287 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 NAPEPLDQ6IQ20 393 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 SLC39A5Q6ZMH5 540 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CYP4V2Q6ZWL3 525 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PID1Q7Z2X4 250 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 STRA8Q7Z7C7 330 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TMEM110Q86TL2 294 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 LINC00523Q86TU6 105 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TTC30AQ86WT1 665 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 FAM131BQ86XD5 332 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 C10orf107Q8IVU9 208 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 KIAA0319LQ8IZA0 1049 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ADGRF2Q8IZF7 708 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 DEFB107AQ8IZN7 70 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 MPP5Q8N3R9 675 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 FBXW8Q8N3Y1 598 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF276Q8N554 614 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 DCLK2Q8N568 766 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 SLC25A41Q8N5S1 370 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PQLC3Q8N755 202 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 EFHBQ8N7U6 833 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ANKRD52Q8NB46 1076 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 GLB1L3Q8NCI6 653 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 APPL2Q8NEU8 664 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PPHLN1Q8NEY8 458 aaKnown RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PRSS33Q8NF86 280 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PPTC7Q8NI37 304 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 GDPD5Q8WTR4 605 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 UCMAQ8WVF2 138 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 FAM136AQ96C01 138 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ZBTB10Q96DT7 871 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 FAR2Q96K12 515 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 HSFY1Q96LI6 401 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CLUHP3Q96NS8 147 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 BTBD9Q96Q07 612 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 VAT1Q99536 393 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 RBBP8Q99708 897 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 MRPL45Q9BRJ2 306 aaKnown RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 RTKNQ9BST9 563 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 HAUS8Q9BT25 410 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 EFHD1Q9BUP0 239 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TRIM15Q9C019 465 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ILKAPQ9H0C8 392 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TASP1Q9H6P5 420 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 USP29Q9HBJ7 922 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 DMAP1Q9NPF5 467 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TCF7L2Q9NQB0 619 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 C20orf96Q9NUD7 363 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 SYBUQ9NX95 663 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ZDHHC7Q9NXF8 308 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ETAA1Q9NY74 926 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 RRN3Q9NYV6 651 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 COX16Q9P0S2 106 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 IGSF9Q9P2J2 1179 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 COPG2Q9UBF2 871 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 CDH22Q9UJ99 828 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PACSIN3Q9UKS6 424 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TRHDEQ9UKU6 1024 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 VANGL2Q9ULK5 521 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PLA2G4CQ9UP65 541 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 ASB3Q9Y575 518 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 COMMD3-BMI1R4GMX3 469 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 PTPRZ1P23471 2315 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-241ENST00000556374 TECTAO75443 2155 aa4.41□□□□□ -1.7
ATXN3-241ENST00000556374 NCOR2Q9Y618 2525 aa4.4□□□□□ -1.7
ATXN3-241ENST00000556374 CHD8Q9HCK8 2581 aa4.4□□□□□ -1.7
ATXN3-241ENST00000556374 ZFHX4Q86UP3 3567 aa4.4□□□□□ -1.7
ATXN3-241ENST00000556374 GVINP1Q7Z2Y8 2422 aa4.4□□□□□ -1.7
ATXN3-241ENST00000556374 MAGEB16A2A368 324 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 RRN3P2A6NIE6 340 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 TRPC5OSA6NMA1 111 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 DIRC3C9JPN6 131 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 E9PBE3 544 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 M0QYT0 321 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 NEMP1O14524 444 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 CYB561D2O14569 222 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 KIAA0355O15063 1070 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 HDAC3O15379 428 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PAPSS1O43252 624 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 DCXO43602 365 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 PEX1O43933 1283 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 NRP2O60462 931 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 UGT1A9O60656 530 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 KLHL41O60662 606 aa4.4□□□□□ -1.71
ATXN3-241ENST00000556374 NOL3O60936 208 aaKnown RBP4.4□□□□□ -1.71
ATXN3-241ENST00000556374 SRP72O76094 671 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms