RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 PCDHGA9Q9Y5G4 932 aaKnown RBP16.61■□□□□ 0.25
XRCC3-215ENST00000555964 DNMT3AQ9Y6K1 912 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-215ENST00000555964 SEC16AO15027 2179 aa16.61■□□□□ 0.25
XRCC3-215ENST00000555964 MED13Q9UHV7 2174 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 BLACEA4D250 179 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 KLHL33A6NCF5 533 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 TPM3P06753 285 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 SPAM1P38567 509 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 ITGA9Q13797 1035 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 SLC18A3Q16572 532 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 ATP13A5Q4VNC0 1218 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 TEX44Q53QW1 395 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 TMTC4Q5T4D3 741 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 FHL5Q5TD97 284 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 ARMC6Q6NXE6 501 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 C11orf96Q7Z7L8 435 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 CARFQ8N187 725 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 BEND7Q8N7W2 519 aaPredicted RBP16.6■□□□□ 0.25
XRCC3-215ENST00000555964 SLC25A23Q9BV35 468 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 CEP41Q9BYV8 373 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 DEF6Q9H4E7 631 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 FANCEQ9HB96 536 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 GLOD4Q9HC38 313 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 ACSS2Q9NR19 701 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 NENFQ9UMX5 172 aa16.6■□□□□ 0.25
XRCC3-215ENST00000555964 IGHV5-51A0A0C4DH38 117 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 UBA6A0AVT1 1052 aaPredicted RBP16.59■□□□□ 0.25
XRCC3-215ENST00000555964 PMPCBO75439 489 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 AGFG2O95081 481 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 MT-CYBP00156 380 aaPredicted RBP16.59■□□□□ 0.25
XRCC3-215ENST00000555964 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 ARHGAP25P42331 645 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 NR2C2P49116 596 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 TUBB4BP68371 445 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 HSD11B2P80365 405 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 TUBB2AQ13885 445 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 MESDQ14696 234 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 RPE65Q16518 533 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 PPP2R5EQ16537 467 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 KHDC1Q4VXA5 237 aaKnown RBP16.59■□□□□ 0.25
XRCC3-215ENST00000555964 C4orf17Q53FE4 359 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 LRRC38Q5VT99 294 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 PWWP2BQ6NUJ5 590 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 TMEM135Q86UB9 458 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 OOSP2Q86WS3 158 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 CPNE8Q86YQ8 564 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 RFX6Q8HWS3 928 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 CPT1CQ8TCG5 803 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 ZFPM2Q8WW38 1151 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 TUBB2BQ9BVA1 445 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 BPIFA1Q9NP55 256 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 FGF21Q9NSA1 209 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 FAM153AQ9UHL3 310 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 WDR37Q9Y2I8 494 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 PKP3Q9Y446 797 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 PCDHGB7Q9Y5F8 929 aa16.59■□□□□ 0.25
XRCC3-215ENST00000555964 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■□□□□ 8.1
XRCC3-215ENST00000555964 NOTCH2Q04721 2471 aa16.58■□□□□ 0.25
XRCC3-215ENST00000555964 OR5K3A6NET4 321 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 K7EM74 188 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 POP7O75817 140 aaKnown RBP16.58■□□□□ 0.24
XRCC3-215ENST00000555964 ZBTB11O95625 1053 aaPredicted RBP16.58■□□□□ 0.24
XRCC3-215ENST00000555964 EPOP01588 193 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 KRT1P04264 644 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 GYPCP04921 128 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 KLK3P07288 261 aaPredicted RBP16.58■□□□□ 0.24
XRCC3-215ENST00000555964 PYGMP11217 842 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 FOLR1P15328 257 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 VARSP26640 1264 aaKnown RBP16.58■□□□□ 0.24
XRCC3-215ENST00000555964 GSDMDP57764 484 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 XRCC4Q13426 336 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 LONRF2Q1L5Z9 754 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 CAVIN1Q6NZI2 390 aaKnown RBP16.58■□□□□ 0.24
XRCC3-215ENST00000555964 HPS6Q86YV9 775 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 TMEM126BQ8IUX1 230 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 D2HGDHQ8N465 521 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 DDHD1Q8NEL9 900 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 SPATA22Q8NHS9 363 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 RNF31Q96EP0 1072 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 TEKT5Q96M29 485 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 DDX56Q9NY93 547 aaKnown RBP16.58■□□□□ 0.24
XRCC3-215ENST00000555964 SPTBP11277 2137 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 SHANK1Q9Y566 2161 aa16.58■□□□□ 0.24
XRCC3-215ENST00000555964 GLYATL1P3A0A0U1RQE8 302 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 TIAF1O95411 115 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 EBLN1P0CF75 366 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 MTHFD1P11586 935 aaKnown RBP16.57■□□□□ 0.24
XRCC3-215ENST00000555964 PTPN3P26045 913 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 HNRNPH3P31942 346 aaKnown RBP16.57■□□□□ 0.24
XRCC3-215ENST00000555964 TFDP2Q14188 446 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 CHRNA6Q15825 494 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 FAM151BQ6UXP7 276 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 GLT6D1Q7Z4J2 308 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 RHOT2Q8IXI1 618 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 GPR150Q8NGU9 434 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 TFB1MQ8WVM0 346 aaKnown RBP16.57■□□□□ 0.24
XRCC3-215ENST00000555964 MR1Q95460 341 aa16.57■□□□□ 0.24
XRCC3-215ENST00000555964 LRFN5Q96NI6 719 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms