RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 C9orf50Q5SZB4 431 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GFI1BQ5VTD9 330 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 LCN10Q6JVE6 187 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 TEX38Q6PEX7 206 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 BRAT1Q6PJG6 821 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 IL27RAQ6UWB1 636 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 ADIPOR2Q86V24 386 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 CEP57Q86XR8 500 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GALNT13Q8IUC8 556 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 ACVR1CQ8NER5 493 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 PPP4R1Q8TF05 950 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 ATP6V1E2Q96A05 226 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 HDAC11Q96DB2 347 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 WBP1Q96G27 269 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 FAM84BQ96KN1 310 aaPredicted RBP5.24□□□□□ -1.57
VRK1-205ENST00000555402 LMLNQ96KR4 655 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 C3orf30Q96M34 536 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 QRFPRQ96P65 431 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GBP5Q96PP8 586 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 EDEM3Q9BZQ6 932 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 ZWILCHQ9H900 591 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 MCM9Q9NXL9 1143 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 A0A0B4J293 547 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 RPN1P04843 607 aaKnown RBP5.23□□□□□ -1.57
VRK1-205ENST00000555402 FYNP06241 537 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 PRSS2P07478 247 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 SCG2P13521 617 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 RAB28P51157 221 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 PGGT1BP53609 377 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 PPARDQ03181 441 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 Q0VFX4 171 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 TRAF2Q12933 501 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 HLFQ16534 295 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 ARMC4Q5T2S8 1044 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 HECTD3Q5T447 861 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 FAM69BQ5VUD6 431 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 ALS2CLQ60I27 953 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 CCNI2Q6ZMN8 369 aaPredicted RBP5.23□□□□□ -1.57
VRK1-205ENST00000555402 TMEM173Q86WV6 379 aaPredicted RBP5.23□□□□□ -1.57
VRK1-205ENST00000555402 CHERPQ8IWX8 916 aaKnown RBP5.23□□□□□ -1.57
VRK1-205ENST00000555402 THNSL1Q8IYQ7 743 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 PM20D2Q8IYS1 436 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 PGBD5Q8N414 524 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 TTC30BQ8N4P2 665 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 SLC5A8Q8N695 610 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 NKAIN3Q8N8D7 197 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 SLC38A9Q8NBW4 561 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 OR10S1Q8NGN2 331 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 WDR20Q8TBZ3 569 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 SLC44A1Q8WWI5 657 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 NXNL1Q96CM4 212 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 ERLEC1Q96DZ1 483 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 SPACA9Q96E40 222 aaPredicted RBP5.23□□□□□ -1.57
VRK1-205ENST00000555402 CFAP57Q96MR6 1250 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 ZNF830Q96NB3 372 aaPredicted RBP5.23□□□□□ -1.57
VRK1-205ENST00000555402 NEK1Q96PY6 1258 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 RAB3IPQ96QF0 476 aaPredicted RBP5.23□□□□□ -1.57
VRK1-205ENST00000555402 GFI1Q99684 422 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 MEIS3Q99687 375 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 ADPGKQ9BRR6 497 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 GRPEL1Q9HAV7 217 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 OLAHQ9NV23 265 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 SELENONQ9NZV5 590 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 PADI3Q9ULW8 664 aa5.23□□□□□ -1.57
VRK1-205ENST00000555402 A0A0U1RQJ8 604 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 PLK4O00444 970 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 HSP90AB1P08238 724 aaKnown RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 HOXC6P09630 235 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 FDPSP14324 419 aaKnown RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 KCNA5P22460 613 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 TNFRSF8P28908 595 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 GABRA5P31644 462 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 PEX5P50542 639 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 TFCP2Q12800 502 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 OASLQ15646 514 aaKnown RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 CALCRLQ16602 461 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 CCDC184Q52MB2 194 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 KRTCAP3Q53RY4 240 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 KRT39Q6A163 491 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 SHQ1Q6PI26 577 aaKnown RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 ZNF534Q76KX8 674 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 DNAJB7Q7Z6W7 309 aaPredicted RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 MAP7D3Q8IWC1 876 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 ZNF34Q8IZ26 560 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 GCSAMQ8N6F7 178 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 KIF18AQ8NI77 898 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 THAP6Q8TBB0 222 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 TAS1R2Q8TE23 839 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 LINC00615Q96LM1 132 aaPredicted RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 PCYT2Q99447 389 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 NAA11Q9BSU3 229 aaPredicted RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 PCDH9Q9HC56 1237 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 PIH1D3Q9NQM4 214 aaKnown RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 TMEM184BQ9Y519 407 aaPredicted RBP5.22□□□□□ -1.57
VRK1-205ENST00000555402 PTPRCP08575 1304 aa5.22□□□□□ -1.57
VRK1-205ENST00000555402 FAM170AA1A519 330 aa5.21□□□□□ -1.58
VRK1-205ENST00000555402 SPRY1O43609 319 aaPredicted RBP5.21□□□□□ -1.58
VRK1-205ENST00000555402 SSX4O60224 188 aa5.21□□□□□ -1.58
VRK1-205ENST00000555402 CREG1O75629 220 aa5.21□□□□□ -1.58
VRK1-205ENST00000555402 RFPL2O75678 378 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms