RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SPANXN2Q5MJ10 180 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 KDM4DQ6B0I6 523 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 LAIR1Q6GTX8 287 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 TFAP2EQ6VUC0 442 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 NLRP8Q86W28 1048 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 CCDC36Q8IYA8 594 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 CLEC4FQ8N1N0 589 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 ARRDC4Q8NCT1 418 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 SLC38A4Q969I6 547 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 C18orf25Q96B23 403 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 TRNT1Q96Q11 434 aaKnown RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 HOPXQ9BPY8 73 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 UGT2B28Q9BY64 529 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 ACE2Q9BYF1 805 aaPredicted RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 ING3Q9NXR8 418 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 ARHGAP28Q9P2N2 729 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 NARFQ9UHQ1 456 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 TINAGQ9UJW2 476 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 TNPO3Q9Y5L0 923 aaKnown RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 COMMD10Q9Y6G5 202 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 STON1Q9Y6Q2 735 aa9.45□□□□□ -0.9
SIX4-202ENST00000554079 MYO18AQ92614 2054 aaKnown RBP9.45□□□□□ -0.9
SIX4-202ENST00000554079 A0A096LPK6 155 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 SLC12A8A0AV02 714 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 FAM92AA1XBS5 289 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 BBIP1A8MTZ0 92 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 F8W036 122 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 NFIBO00712 420 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 UBDO15205 165 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 CABYRO75952 493 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 FADS2O95864 444 aaKnown RBP9.44□□□□□ -0.9
SIX4-202ENST00000554079 SLC2A3P11169 496 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 MYL9P24844 172 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 RYKP34925 604 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 PIK3CBP42338 1070 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 ATP4BP51164 291 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 ARHGDIBP52566 201 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 ALDH6A1Q02252 535 aaKnown RBP9.44□□□□□ -0.9
SIX4-202ENST00000554079 MVKQ03426 396 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 SPATS1Q496A3 300 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 WDR44Q5JSH3 913 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 IER5Q5VY09 327 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 TEX261Q6UWH6 196 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 C16orf86Q6ZW13 317 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 GALNT10Q86SR1 603 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 SYVN1Q86TM6 617 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 STK32CQ86UX6 486 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 KIAA0319LQ8IZA0 1049 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 VWA5B2Q8N398 1253 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 ZNF680Q8NEM1 530 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 CNIH3Q8TBE1 160 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 RIT1Q92963 219 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 FAM84BQ96KN1 310 aaPredicted RBP9.44□□□□□ -0.9
SIX4-202ENST00000554079 FAM84AQ96KN4 292 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 RBBP8Q99708 897 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 PIP5K1AQ99755 562 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 TTLL2Q9BWV7 592 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 SMURF2Q9HAU4 748 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 RC3H2Q9HBD1 1191 aaKnown RBP9.44□□□□□ -0.9
SIX4-202ENST00000554079 USE1Q9NZ43 259 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 WRAP73Q9P2S5 460 aaPredicted RBP9.44□□□□□ -0.9
SIX4-202ENST00000554079 TLK1Q9UKI8 766 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 TRHDEQ9UKU6 1024 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 DAGLAQ9Y4D2 1042 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 PCDHA9Q9Y5H5 950 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 U3KQ87 197 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 B4DXG7 233 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 SPATA31C2B4DYI2 1134 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 BTN3A3O00478 584 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 AIREO43918 545 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 PGLSO95336 258 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 METTL18O95568 372 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 ANGPTL1O95841 491 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 WDPCPO95876 746 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 DNTTP04053 509 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 APOA4P06727 396 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 NCK1P16333 377 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 SLC6A2P23975 617 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 GLUD2P49448 558 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 GSK3BP49841 420 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 CLCNKAP51800 687 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 RBP5P82980 135 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 FLI1Q01543 452 aaPredicted RBP9.44□□□□□ -0.9
SIX4-202ENST00000554079 GABPAQ06546 454 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 TRIP4Q15650 581 aaPredicted RBP9.44□□□□□ -0.9
SIX4-202ENST00000554079 PTPN20Q4JDL3 420 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 ARMC4Q5T2S8 1044 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 LRFN4Q6PJG9 635 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 C15orf39Q6ZRI6 1047 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 B3GNT8Q7Z7M8 397 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 FAM124AQ86V42 546 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 OR8H2Q8N162 312 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 YIPF5Q969M3 257 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 WBP1Q96G27 269 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 MFSD14AQ96MC6 490 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 ZNF416Q9BWM5 594 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 SHARPINQ9H0F6 387 aa9.44□□□□□ -0.9
SIX4-202ENST00000554079 SAV1Q9H4B6 383 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms