RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 UBXN4Q92575 508 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 RNF25Q96BH1 459 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 PKNOX2Q96KN3 472 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 FERMT1Q9BQL6 677 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SLC7A5P2Q9GIP4 190 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 ACTL8Q9H568 366 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 GLOD4Q9HC38 313 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 LRRC4CQ9HCJ2 640 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 DDX56Q9NY93 547 aaKnown RBP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 OGFRQ9NZT2 677 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 ZNF624Q9P2J8 865 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 NFKBIL1Q9UBC1 381 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SLC23A2Q9UGH3 650 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 VPS4AQ9UN37 437 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 SLC30A1Q9Y6M5 507 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 MYO9AB2RTY4 2548 aa9.72□□□□□ -0.85
ACTN1-210ENST00000553779 GLYATL1P3A0A0U1RQE8 302 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 OR2AG2A6NM03 316 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TTLL8A6PVC2 850 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 C21orf140B9A014 251 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 MTSS1O43312 755 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 MAP3K7O43318 606 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 CBFA2T2O43439 604 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 AGFG2O95081 481 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 SLC35G4P0C7Q5 338 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TMEM253P0C7T8 217 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 EBLN1P0CF75 366 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 GP1BBP13224 206 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 NELFEP18615 380 aaKnown RBP9.71□□□□□ -0.86
ACTN1-210ENST00000553779 MSH3P20585 1137 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 PMS2P54278 862 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 MLLT10P55197 1068 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 ACY1Q03154 408 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TMEM115Q12893 351 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-210ENST00000553779 PRKAA1Q13131 559 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TRIM14Q14142 442 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TFDP2Q14188 446 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 KCNAB1Q14722 419 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 ATP13A5Q4VNC0 1218 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 FAM182AQ5T1J6 154 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 CCDC181Q5TID7 509 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 AGAP9Q5VTM2 703 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 KAZNQ674X7 775 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 SLC9A4Q6AI14 798 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TCTN3Q6NUS6 607 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TMC3Q7Z5M5 1100 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 OOSP2Q86WS3 158 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 CCDC50Q8IVM0 306 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 RHOT2Q8IXI1 618 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 RHOT1Q8IXI2 618 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 CNTD1Q8N815 330 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 IPMKQ8NFU5 416 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 SLC35G2Q8TBE7 412 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TFB1MQ8WVM0 346 aaKnown RBP9.71□□□□□ -0.86
ACTN1-210ENST00000553779 MR1Q95460 341 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 VPS35Q96QK1 796 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TRIB3Q96RU7 358 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 XPO4Q9C0E2 1151 aaKnown RBP9.71□□□□□ -0.86
ACTN1-210ENST00000553779 TRABDQ9H4I3 376 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 SLC40A1Q9NP59 571 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 LHX9Q9NQ69 397 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 ACSS2Q9NR19 701 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 HACD3Q9P035 362 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 ADGRG1Q9Y653 693 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 FER1L5A0AVI2 2057 aa9.71□□□□□ -0.86
ACTN1-210ENST00000553779 NUP210LQ5VU65 1888 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 RELNP78509 3460 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 MACROD2A1Z1Q3 448 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 TLCD2A6NGC4 264 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 ZNF487B1APH4 448 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 KCNJ13O60928 360 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 CPNE3O75131 537 aaKnown RBP9.7□□□□□ -0.86
ACTN1-210ENST00000553779 SCRG1O75711 98 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 FGF5P12034 268 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 NFKB1P19838 968 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 FECHP22830 423 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 F8A1P23610 371 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 ARHGAP25P42331 645 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 SRSF1Q07955 248 aaKnown RBP eCLIP9.7□□□□□ -0.86
ACTN1-210ENST00000553779 SLC14A2Q15849 920 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 LONRF2Q1L5Z9 754 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 KHDC1Q4VXA5 237 aaKnown RBP9.7□□□□□ -0.86
ACTN1-210ENST00000553779 FNBP1LQ5T0N5 605 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 ABRAXAS1Q6UWZ7 409 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 WASH2PQ6VEQ5 465 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 DET1Q7L5Y6 550 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 TMEM135Q86UB9 458 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 VSIG1Q86XK7 387 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 ZNF547Q8IVP9 402 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 GPR150Q8NGU9 434 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 P3H4Q92791 437 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 LRRC45Q96CN5 670 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 EID2BQ96D98 161 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 DCUN1D1Q96GG9 259 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 ZNF514Q96K75 400 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-210ENST00000553779 CCDC42Q96M95 316 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 C12orf66Q96MD2 445 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 SLC25A23Q9BV35 468 aa9.7□□□□□ -0.86
ACTN1-210ENST00000553779 SPRY4Q9C004 299 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms