RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 FOXRED2Q8IWF2 684 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 CHERPQ8IWX8 916 aaKnown RBP4.15□□□□□ -1.75
FCF1-204ENST00000553673 RPAP2Q8IXW5 612 aaPredicted RBP4.15□□□□□ -1.75
FCF1-204ENST00000553673 TEX11Q8IYF3 940 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 DNASE2BQ8WZ79 361 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 RND1Q92730 232 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 TANKQ92844 425 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 BICD1Q96G01 975 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 CCDC34Q96HJ3 373 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 PGAM5Q96HS1 289 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 CMTM3Q96MX0 182 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 CHCHD6Q9BRQ6 235 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 SIL1Q9H173 461 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 BLOC1S4Q9NUP1 217 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 SEPT11Q9NVA2 429 aaKnown RBP4.15□□□□□ -1.75
FCF1-204ENST00000553673 ZNF224Q9NZL3 707 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 PNMA2Q9UL42 364 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 ACSL5Q9ULC5 683 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 VDAC3Q9Y277 283 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 LOXL2Q9Y4K0 774 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 NHSQ6T4R5 1651 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 IL16Q14005 1332 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 USP42Q9H9J4 1324 aaKnown RBP4.15□□□□□ -1.75
FCF1-204ENST00000553673 KCPQ6ZWJ8 1503 aa4.15□□□□□ -1.75
FCF1-204ENST00000553673 KANSL1LA0AUZ9 987 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 ANKRD18BA2A2Z9 1011 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 MAGEA13PA6NCF6 341 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 AP3D1O14617 1153 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 PTP4A3O75365 173 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 KDM4BO94953 1096 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 CAMTA2O94983 1202 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 ZBTB11O95625 1053 aaPredicted RBP4.14□□□□□ -1.75
FCF1-204ENST00000553673 PMS2P2O95744 297 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 IGKV3-20P01619 116 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 HOXB7P09629 217 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 MYL6BP14649 208 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 TAS2R40P59535 323 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 ACSM2AQ08AH3 577 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 ZNF155Q12901 538 aaPredicted RBP4.14□□□□□ -1.75
FCF1-204ENST00000553673 MAD2L1Q13257 205 aaPredicted RBP4.14□□□□□ -1.75
FCF1-204ENST00000553673 PNLIPRP3Q17RR3 467 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 IZUMO4Q1ZYL8 232 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 PAPPA-AS1Q5QFB9 102 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 C9orf50Q5SZB4 431 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 GPATCH4Q5T3I0 446 aaKnown RBP4.14□□□□□ -1.75
FCF1-204ENST00000553673 GKAP1Q5VSY0 366 aaPredicted RBP4.14□□□□□ -1.75
FCF1-204ENST00000553673 ACSM2BQ68CK6 577 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 RBM23Q86U06 439 aaKnown RBP4.14□□□□□ -1.75
FCF1-204ENST00000553673 TMTC2Q8N394 836 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 C1orf131Q8NDD1 294 aaKnown RBP4.14□□□□□ -1.75
FCF1-204ENST00000553673 LILRB1Q8NHL6 650 aaPredicted RBP4.14□□□□□ -1.75
FCF1-204ENST00000553673 DNAAF4Q8WXU2 420 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 ORAI1Q96D31 301 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 PPP1R13BQ96KQ4 1090 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 CSF3RQ99062 836 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 MAGIXQ9H6Y5 334 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 C1RLQ9NZP8 487 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 OR14J1Q9UGF5 321 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 NARFQ9UHQ1 456 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 FBXW11Q9UKB1 542 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 PCDHGB1Q9Y5G3 927 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 PKD1L3Q7Z443 1732 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 FANCIQ9NVI1 1328 aa4.14□□□□□ -1.75
FCF1-204ENST00000553673 RGPD5Q99666 1765 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 C1orf226A1L170 272 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 FSD2A1L4K1 749 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 FRMD3A2A2Y4 597 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 SRRM3A6NNA2 597 aaPredicted RBP4.13□□□□□ -1.75
FCF1-204ENST00000553673 A8MZ25 164 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 M0QZ24 198 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 HS3ST1O14792 307 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 GPC4O75487 556 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 HIST1H2ABP04908 130 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 LINC00271P0C7V0 271 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 HIST1H2ADP20671 130 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 TM4SF1P30408 202 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 HOXA13P31271 388 aaPredicted RBP4.13□□□□□ -1.75
FCF1-204ENST00000553673 PDLIM4P50479 330 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 CLCN3P51790 818 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 GALCP54803 685 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 CDH8P55286 799 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 PDE1BQ01064 536 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 GRSF1Q12849 480 aaKnown RBP eCLIP4.13□□□□□ -1.75
FCF1-204ENST00000553673 AIMP1Q12904 312 aaKnown RBP4.13□□□□□ -1.75
FCF1-204ENST00000553673 AIMP2Q13155 320 aaKnown RBP4.13□□□□□ -1.75
FCF1-204ENST00000553673 DECR1Q16698 335 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 MYLK3Q32MK0 819 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 PCGF3Q3KNV8 242 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 SETMARQ53H47 684 aaPredicted RBP4.13□□□□□ -1.75
FCF1-204ENST00000553673 ITPRIPL1Q6GPH6 555 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 JADE1Q6IE81 842 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 MZT2BQ6NZ67 158 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 KIF6Q6ZMV9 814 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 HIST3H2AQ7L7L0 130 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 C16orf82Q7Z2V1 217 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 CUZD1Q86UP6 607 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 TMPRSS12Q86WS5 348 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 ADGRF2Q8IZF7 708 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 TTC39CQ8N584 583 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 WDTC1Q8N5D0 677 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms